Actinomadura madurae: LUW76_31065
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Entry
LUW76_31065 CDS
T08933
Name
(GenBank) TerD family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amaz
Actinomadura madurae
Pathway
amaz03030
DNA replication
amaz03430
Mismatch repair
amaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LUW76_31065
03430 Mismatch repair
LUW76_31065
03440 Homologous recombination
LUW76_31065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amaz03032
]
LUW76_31065
03400 DNA repair and recombination proteins [BR:
amaz03400
]
LUW76_31065
Enzymes [BR:
amaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LUW76_31065
DNA replication proteins [BR:
amaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LUW76_31065
DNA repair and recombination proteins [BR:
amaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LUW76_31065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
PTCB-BRCT
Rv2179c-like
AGAO-like_N2
Motif
Other DBs
NCBI-ProteinID:
URM98433
LinkDB
All DBs
Position
6606755..6608440
Genome browser
AA seq
561 aa
AA seq
DB search
MFGNEWALVDVETSGLRAVQHRILSLAVVTVGSDGRTSGEYSTLLDPGCDPGPVHIHGLT
PERLKGAPKFEDVSRRVAEMLRGRVLVAHNAPFDYGFLAQEFQRANVRLPVERRLCTLAL
NRRLSPATGDLKLGTLAAHYGIKPSKAHDALEDARTLRGVLRGSLQEASRLGLALPFVAC
PPKQNFRARIPKTRCAYRCPGRFGDRLVQGMKVAITGETETPRERLTERAVAAGLNMMTS
VSRHTSLLVANDPGSGTAKARRARQDGVPVIDERRFRELLRDVQPGTPHGTREQARPVEK
PPVRKGPLEGRRVLVLGGTHPRASAARSAVVELGGAAAVNLSAGVTDVVALEGGEPDRRM
ERVVRLEVPVHDVEWLKAPEQAETVRVSTTVLPRGAAIDLPAAERWTVGASWVQHAACEV
DVVAFALDEDGQVSCDEDFVFYGAAETPDGTVRLAAEGPTEQAIVIGLAALPEAVRKVTV
AAAIDGDLTFGELGAVELVTGPGDGERAHAQATLDAGTTERTMLVAEVYRRGPGWRLRVV
GQGYDFGLDALARSFGVEVEE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggaatgagtgggcgctggtggacgtggagacttctgggctccgagccgttcag
cacaggattctgtccctcgccgtggtaacggtcggaagcgacgggaggacgagcggggag
tattccaccctgctcgatccgggatgcgatcccgggccggttcacattcacgggctgacg
cccgagaggctgaaaggggcgcccaagttcgaggacgtgtcccggcgcgtcgcggaaatg
ctccgcggccgggtgctcgtcgcccacaacgcccccttcgactacggcttcctcgcgcag
gagttccagcgcgcgaacgtccggcttccggtcgaacggcggttgtgcacgctggcgctg
aaccgccggctctccccggcgaccggcgacctgaagctcgggacgctggccgcgcactac
gggatcaagccctccaaggcccacgacgcgctggaggacgccaggacgctccgaggcgtg
ctgcgcggatcgctccaggaggcgagccggctcggtctcgcgctgccgttcgtggcgtgc
ccgccgaagcagaacttccgggcaaggattcccaagacccggtgcgcctaccggtgtccg
ggcaggttcggcgaccggctcgtccaggggatgaaggtcgccatcaccggggagaccgag
acgccgcgcgagaggctcaccgagcgggcggtggccgcggggctgaacatgatgacgtcc
gtgagccgccacacgagcctgctggtggcgaacgatcccggctccggcacggccaaggca
cgccgcgcacgccaggacggggtgcccgtcatcgacgagcggaggttccgggaactgctg
cgggacgtccagcccggcaccccgcacggcacgcgggagcaggcgaggcccgtggagaag
ccgccggtgaggaaggggccgctcgaagggcgccgcgtgctcgtcctcggcggaacccat
ccgagggcgtccgccgcgcggagcgcggtcgtggagctggggggcgccgccgcggtgaac
ctgtcggccggcgtgacggacgtcgtggccctcgaaggcggcgagccggatcggcgcatg
gagcgggtggtccgcctggaggtccccgtccacgatgtggagtggctcaaggcgccggag
caggcggagactgtccgggtgtcgacgacagtgctgccgagaggtgcggccatcgacctc
ccggccgcggagaggtggacggtcggcgcctcctgggtccagcacgcggcctgcgaggtg
gacgtggtggcgttcgcgctcgacgaggacggccaggtgtcctgcgacgaggacttcgtc
ttctacggcgccgccgagacccccgacgggacggtgcggctggcggccgagggccctacc
gagcaggcgatcgtgatcggcctggccgcgcttcccgaggccgtccgcaaggtcaccgtg
gcggcggcgatcgacggcgacctcacgttcggcgagctgggggccgtcgaactggtcacc
ggccccggcgacggcgagcgcgcgcacgcgcaggcgaccctcgacgccgggaccacggag
cggacgatgctggtcgccgaggtgtaccggcgcggcccgggatggcggctgcgcgtcgtc
ggccagggatacgacttcggactggacgccctggcgcggagcttcggcgtcgaggtggag
gagtaa
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