Actinomadura madurae: LUW76_32585
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Entry
LUW76_32585 CDS
T08933
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
amaz
Actinomadura madurae
Pathway
amaz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LUW76_32585
09124 Replication and repair
03420 Nucleotide excision repair
LUW76_32585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amaz03021
]
LUW76_32585
03400 DNA repair and recombination proteins [BR:
amaz03400
]
LUW76_32585
Enzymes [BR:
amaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LUW76_32585
Transcription machinery [BR:
amaz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LUW76_32585
DNA repair and recombination proteins [BR:
amaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LUW76_32585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
URM98693
LinkDB
All DBs
Position
complement(6895893..6897545)
Genome browser
AA seq
550 aa
AA seq
DB search
MTDGPLIVQSDKTLLLEVDHDLADACRKEIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVVDTLIRYSRYPVPHALLVDVADTMARYGRLRLEKDPAHGLILSSSDRSVLEEVL
RAKKIKGMIGDRVGEDAVAVHPSERGALKQALLKLGWPAEDLAGYVDGEAHAISLAEDGW
ALRSYQRDAAETFWHGGSGVVVLPCGAGKTIVGAAAMARAQATTLILVTNTVSAHQWKQE
LLRRTSLTEDEIGEYTGTKKEIRPVTIATYQIMTTRRKGAYTHLELFDARDWGLVVYDEV
HLLPAPIFRMTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDMEAQGWIAP
ADCVEVRVTLTDSERLAYATAEPEERYRFCATTDTKTKLIQALVDRHRGEQTLVIGQYID
QLDELGALLDAPVIKGETRVRERERLFDAFRSGEIDVLVVSKVANFSIDLPEASVAVQVS
GAFGSRQEEAQRLGRLLRPKASGAGARFYAVVARDTLDQDYAAHRQRFLAEQGYAYRIVD
ADTVLAGDDF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggtccgctcatcgtccagtccgacaagacgctgctgctggaggtcgaccac
gacctggccgacgcctgccgcaaggagatcgccccgttcgccgagctcgaacgggcgccc
gagcacgtccacacctaccgggtgacgccgctcgcgctgtggaacgcgcgggccgccggg
cacgacgccgagcaggtcgtcgacacgctgatccggtactcccgctaccccgtcccgcac
gccctgctcgtggacgtcgccgacacgatggcgcggtacgggcggctgcggctggagaag
gacccggcgcacgggctcatcctgtcgtcctcggaccggtcggtcctggaggaggtgctg
cgcgccaagaagatcaagggcatgatcggcgaccgggtcggcgaggacgccgtcgccgtc
cacccgagcgagcgcggcgccctcaagcaggcactgctcaagctcggctggcccgccgag
gacctcgccggatacgtggacggcgaggcgcacgccatctccctcgccgaggacggctgg
gccctgcgttcctaccagcgggacgccgccgagacgttctggcacggcgggtccggcgtc
gtcgtcctgccctgcggcgccggcaagaccatcgtgggggccgccgccatggcccgcgcc
caggccaccacgctgatcctcgtcaccaacaccgtctcggcgcaccagtggaagcaggag
ctcctgcgccgcacgtccctcaccgaggacgagatcggcgagtacaccggcacgaagaag
gagatccggccggtcaccatcgccacctaccagatcatgacgacgcgccggaagggcgcc
tacacgcacctggagctcttcgacgcccgcgactggggcctggtcgtgtacgacgaggtc
cacctgctgcccgcgccgatcttccggatgaccgccgacctgcaggcccgccgccgcctc
ggcctcaccgccaccctcgtccgggaggacggccgggaaggcgacgtgttctccctcatc
ggcccgaagcgctacgacgcgccctggaaggacatggaggcgcagggctggatcgcgccg
gccgactgcgtcgaggtacgcgtcacgctcaccgactcggaacgcctggcgtacgcgacc
gccgaacctgaagagcgctaccggttctgcgcgaccaccgacaccaagaccaagctcatc
caagcgctcgtcgaccggcaccgcggcgagcagacgctggtcatcggccagtacatcgac
cagctggacgagctgggcgccctgctggacgcgcccgtcatcaagggagagacgcgggtg
cgggaacgggagcgcctgttcgacgcgttccgctccggcgagatcgacgtcctggtcgtg
tcgaaggtggcgaacttctccatcgacctgcccgaagcgtcggtcgccgtacaggtgtcg
ggtgctttcgggtcgcggcaggaggaggctcagcggctgggacgtctgctgcgtcccaag
gcgtccggcgcgggggctcgcttctacgccgtcgtcgcccgcgacaccctggaccaggac
tacgccgcccaccgccagcgcttcctcgccgaacagggctacgcctaccgcatcgtcgac
gccgacaccgtcctcgccggcgacgacttctga
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