Actinomadura madurae: LUW76_34815
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Entry
LUW76_34815 CDS
T08933
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
amaz
Actinomadura madurae
Pathway
amaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LUW76_34815 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amaz03021
]
LUW76_34815 (rho)
03019 Messenger RNA biogenesis [BR:
amaz03019
]
LUW76_34815 (rho)
Transcription machinery [BR:
amaz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LUW76_34815 (rho)
Messenger RNA biogenesis [BR:
amaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LUW76_34815 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
URM99088
LinkDB
All DBs
Position
7373872..7375869
Genome browser
AA seq
665 aa
AA seq
DB search
MSESSELLTDATSTEPADAAASGAEPAAPRRRRSGTGLSAMVLPELKALASSLGITGTTG
MRKSQLIAAIQEKQGGQEQGSAGGEQGAAAPAKAERPRRSRTTAAKREVSDDQVAIAEAP
AAEQGPSEGQGGVAEKADKSPEKAEKADRGERQGGRQRGNKQDRGASEGRGDRQGRDQGR
EQNAEDGESQGGRDGGRDGNRDGREGREGGGRQRQRGGRERGEGRDRGDRGDRGDQGGGG
RQRGQNQGGGGQHDDDDGGGRGRRGRRFRERNRGRGRDRYEEPVITEDDVLIPVAGILDI
LDNYAFVRTTGYLPGPNDVYVSLAQVRKNGLRKGDVITGAVRQAREGERREKFNALVRLD
TVNGMEPDQAKGRVDFTKLTPLYPQERLRLESDPGILTTRIIDLVSPIGKGQRGLIVSPP
KAGKTMVLQAIANAITKNNPECHLMVVLVDERPEEVTDMQRTVKGEVIHSTFDRPAEDHT
TVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTALYPPKRF
FGAARNIENGGSLTILATALVETGSRMDEVIFEEFKGTGNMELKLNRSLADKRIFPAVDV
DASSTRKEEILMAPEELRVVWQLRRVLHALDTQQALELLIEKMKETKSNAEFLLQVQKTT
VSDDR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaatccagcgaactccttacggacgcaaccagcacggaacccgccgacgccgcc
gcgtccggcgcggagccggccgccccccggcgccgccgctcgggcaccggcctgtcggcc
atggtgctgcccgagctcaaggcgctcgcgtccagcctcggcatcaccggcacgaccggg
atgcgcaagagccagctcatcgccgccatccaggagaagcagggcggccaggagcagggc
tcggcggggggcgagcagggagccgctgccccggcgaaggccgagcgtccgcggcggagc
cgcaccaccgccgccaagcgcgaggtgtccgacgaccaggtcgccatcgccgaggcgccg
gcggccgagcagggcccgtccgaggggcagggcggcgtcgccgagaaggccgacaagtcc
ccggagaaggcggagaaggccgaccggggcgagcggcagggcggccggcagcggggcaac
aagcaggaccggggggcttccgagggacgcggcgaccggcagggccgcgaccagggacgc
gagcagaacgccgaggacggcgaatcccagggtggccgcgacggcggccgggacggcaac
cgcgacgggcgcgagggccgcgagggcggcggacgccagcggcagcgcggcggccgggag
cgcggcgagggccgcgaccggggcgaccgcggcgaccgcggggaccagggcggcggcggc
cggcagcgcggccagaaccagggcggcggcggccagcacgacgatgacgacggcggcggc
cggggccggcgcgggcgccggttccgggagcgcaaccggggccgcggccgcgaccgctac
gaggagccggtgatcaccgaggacgacgtcctcatcccggtcgcgggcatcctcgacatc
ctcgacaactacgcgttcgtccgcacgaccggctacctgcccggcccgaacgacgtgtac
gtgtcgctcgcgcaggtccgcaagaacgggctgcgcaagggcgacgtcatcaccggcgcc
gtccggcaggcgcgcgagggcgagcggcgcgagaagttcaacgcgctggtccgcctcgac
accgtcaacgggatggagcccgaccaggccaagggccgcgtcgacttcacgaagctgacg
ccgctgtacccgcaggagcggctgcgcctggagtccgaccccggcatcctgacgacccgg
atcatcgacctggtgtcgccgatcggcaaggggcagcgcggcctgatcgtgtcgccgccg
aaggccggcaagaccatggtgctccaggcgatcgccaacgcgatcaccaagaacaacccg
gagtgccacctgatggtcgtcctcgtggacgagcgtccggaagaggtcaccgacatgcag
cggacggtgaagggcgaggtcatccactcgaccttcgaccgtcccgccgaggaccacacc
acggtcgccgagctggcgatcgagcgcgccaagcggctcgtcgagctgggccacgacgtc
gtcgtgctgctcgactcgatcacccgcctgggccgggcctacaacctggcggcgcccgcg
tccggccggatcctgtccggcggtgtcgactccacggcgctgtacccgccgaagcggttc
ttcggcgccgcccgcaacatcgagaacggcggctcgctgacgatcctcgccaccgcgctg
gtggagaccgggtcccgcatggacgaggtcatcttcgaggagttcaagggcaccggcaac
atggagctcaagctcaaccggagcctcgccgacaagcggatcttcccggcggtggacgtg
gacgcgtccagcacccgcaaggaggagatcctcatggctcccgaggagctgcgggtggtc
tggcagctgcgccgggtgctccacgcgctcgacacgcagcaggcgctggaactcctcatc
gagaagatgaaggagaccaagtccaacgccgagttcctgctccaggtccagaagaccacg
gtctccgacgaccgctag
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