Actinomadura madurae: LUW76_37120
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Entry
LUW76_37120 CDS
T08933
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amaz
Actinomadura madurae
Pathway
amaz03420
Nucleotide excision repair
amaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LUW76_37120
03430 Mismatch repair
LUW76_37120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaz03400
]
LUW76_37120
Enzymes [BR:
amaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LUW76_37120
DNA repair and recombination proteins [BR:
amaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LUW76_37120
MMR (mismatch excision repair)
Other MMR factors
LUW76_37120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
HHH
VMAP-M4
AAA_11
Motif
Other DBs
NCBI-ProteinID:
URM99492
LinkDB
All DBs
Position
7811833..7813899
Genome browser
AA seq
688 aa
AA seq
DB search
MSAESVLEGLDPEQRAVAEAVKGPVCVLAGAGTGKTRAITHRIAYATLTGVVTPQRVLAV
TFTTRAAGELRSRLRQLGAPGVQARTFHAAALRQLTYFWPRVVGGEPPRIIDSKIGLVAD
AARACRLSLGRTELRDVASEIEWAKVTQHRPEDYPAAVAEAGRRPPAEVVDVARVYAMYE
QLRRERNLLDFEGMLELTAAVLTEHREVAGQVREQYRYFVVDEFQDVNPLQKMLLDTWLG
DRDDLCVVGDPNQTIYSFTGASPSHLLDFTREHPGAKVVRLVRDYRSTPQVVRLANGVIG
QAKGVRHRLELRAQRDNGPEPVFNEYDDEVAEADDAARRARKLIEEGVPAREIAILYRIN
AQSETYESALAAVGVPYVLRGAERFFERPEVREAVVRLRGAARAGGDAETDGMGLIQTVR
HVLSGAGFSDRPPEGAGAARARWESLAALAQLAEDMAADNPKAGLPDFVGELEERAAAQH
APPLEGVTLASLHAAKGLEWDAVFLVGLAEGTLPIVYAKTPEQIEEERRLLYVGVTRARV
HLNLSWALSRSPGGTQMRRPSRFLDGLTGKTTTHMPARVDRSKRRPAKGPQPCRVCGRPL
TAAVERKLGRCEDCPSELNEELLLALKDWRAQVSADQKIPAYVVFTDATLQAIAERCPES
MDELARIPGVGKVKLDRYGDAVLTLCGH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagagtcggtgctggagggactcgaccccgagcagcgggcggtcgccgaagcg
gtcaagggcccggtgtgcgtgctcgcgggcgcgggaacaggcaagacccgggccatcacc
caccggatcgcctacgccaccctgaccggcgtcgtgacgccgcagcgggtgctcgccgtg
acgttcaccacacgcgccgccggggagctgcgcagccggctgcggcagctcggcgcgccc
ggcgtgcaggcccgcaccttccacgcggcggcgctgcggcagctcacctacttctggccg
cgcgtcgtcggcggcgaaccgcccaggatcatcgactcgaagatcggcctcgtcgcggac
gcggcgcgggcctgccggctctccctcgggcggacggagttgcgcgacgtcgcgagcgag
atcgaatgggcgaaggtcacccagcaccgccccgaggactaccccgccgcggtcgccgag
gcgggccgcaggccgcccgccgaggtcgtcgacgtcgcccgcgtctacgccatgtacgag
cagctcaggcgcgagcgcaacctgctcgacttcgaggggatgctggagctgaccgccgcc
gtcctcaccgagcaccgcgaggtcgccggccaggtccgcgagcagtaccggtacttcgtc
gtggacgagttccaggacgtcaacccgctgcagaagatgctgctcgacacctggctcggc
gaccgcgacgacctgtgcgtcgtcggcgaccccaaccagacgatctactcgttcaccggc
gcgtccccgtcccacctgctcgacttcacccgcgagcacccgggcgcgaaggtcgtccgg
ctcgtccgcgactaccgttcgacgccgcaggtcgtccggctggcgaacggggtgatcggg
caggcgaagggcgtccggcaccggctggagctgcgggcccagcgcgacaacgggcccgag
ccggtgttcaacgagtacgacgacgaggtcgccgaggccgacgacgcggcgcgccgcgcc
cgcaagctgatcgaggagggcgtccccgcgcgggagatcgcgatcctgtaccggatcaac
gcgcagtccgagacgtacgagtcggcgctggccgcggtgggcgtcccgtacgtgctgcgc
ggcgcggagcggttcttcgagcggcccgaggtgcgcgaggccgtggtgcgcctgcgcggc
gcggcgcgggcgggcggcgacgccgagaccgacggcatgggactgatccagaccgtccgg
cacgtcctgtccggggccgggttctccgaccggccgcccgagggcgcgggcgcggcccgc
gcacgctgggagtccctcgcggccctggcccagctcgccgaggacatggccgcggacaac
cccaaggccggcctccccgacttcgtcggcgaactggaggagcgcgccgccgcgcagcac
gcgccgcccctggagggcgtcacgctcgcgtccctgcacgccgccaagggccttgaatgg
gatgcggtgttcctcgtggggctcgccgaaggcacgctgcccatcgtctacgccaagacg
cccgagcagatcgaggaggagcggcgtctgctctacgttggcgtgacccgcgcccgcgtg
cacctcaacctgtcctgggcgctgtcgcgctctcccggcggcacgcagatgcgccgcccg
tcccggttcctggacggcctcacgggcaagaccaccacgcacatgcccgcccgcgtcgac
cggtcgaaacggcgtccggccaagggaccgcaaccgtgccgggtgtgcggccggccactc
accgccgccgtcgaacgcaagctcggccgctgcgaagactgcccctccgagctcaacgag
gaactcctcctcgccctcaaggactggcgcgcccaggtctccgccgaccagaagatcccc
gcctacgtcgtcttcacggacgcgacgctccaggcgatcgcggagcgctgccccgagtcg
atggacgagctggcccgcatccccggcgtgggcaaggtcaagctcgaccgctacggcgac
gccgtcctgaccctttgtggccattga
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