Actinomadura madurae: LUW76_41635
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Entry
LUW76_41635 CDS
T08933
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amaz
Actinomadura madurae
Pathway
amaz03030
DNA replication
amaz03430
Mismatch repair
amaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LUW76_41635
03430 Mismatch repair
LUW76_41635
03440 Homologous recombination
LUW76_41635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amaz03032
]
LUW76_41635
03400 DNA repair and recombination proteins [BR:
amaz03400
]
LUW76_41635
Enzymes [BR:
amaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LUW76_41635
DNA replication proteins [BR:
amaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LUW76_41635
DNA repair and recombination proteins [BR:
amaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LUW76_41635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
DUF7508
RNase_H_2
UVR
Motif
Other DBs
NCBI-ProteinID:
URN00297
LinkDB
All DBs
Position
8741817..8743622
Genome browser
AA seq
601 aa
AA seq
DB search
MTAAHGVQGAGVQGTLDDLGTPLHEVTFVVVDLETTGGSAADSAITEIGAVKVRGGEELG
ELGTLVDPGGPVPPFITALTGITTAMVTAAPPIESVLPAFLEFARGCVLVAHNASFDIGF
LKAACAAHGYAWPAFPVVDTVDLARRVLSRDEVPNCKLGTLARFFRTSHEPTHRALADAR
ATVEVLHGLIERIGSFGVTSLEEMRGFAKAPTPEQRRKRHLADDVPSAPGVYLFEDDAGE
VLYVGKSGDLRSRVRNYFTGSETRWRVREMVGLAENVRTIECATGLEAEVRELRLIAEHK
PRYNRRSKFPERAIWLKLTVEPFPRLSIVRECRADGARYLGPISSRRQAEEARAALHEAV
PLRQCTQRLTLRLIERGTTRACALAEIGRCGAPCDGRESADAYAVHAGTARSIMEGDVRP
VVAAAQVRIDRLASELRYEEAAAQRDRLAAFVRAAARGQRLAALARLPELVAARPAFDGG
WELSVVRYGRLAAAGTVPPHARPRPYVDALIATAETVFPPAGEAPGGVALGAPPSAGATA
EEMECVLRWLDLPGVRLVEVDGAWTCPAHGAEGLREWIDRAYDTGYERRETSRRGAGRPL
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcgcacggcgttcagggtgccggtgtacagggcaccctggacgacctcggc
accccgctgcacgaggtcaccttcgtcgtggtcgacctggagaccaccggcggctcggcc
gcggactcggccatcaccgagatcggcgcggtgaaggtgcgcggcggggaggagctcggc
gagctcggcacgctggtcgacccgggcgggcccgtcccgccgttcatcaccgcgctgacc
ggcatcaccacggcgatggtgacggccgccccgccgatcgagtcggtgctgccggccttc
ctggagttcgcgcgcggctgcgtgctcgtcgcgcacaacgcctcgttcgacatcgggttc
ctcaaggccgcctgcgccgcgcacggctacgcctggcccgcgttccccgtcgtcgacacc
gtcgacctggcgcggcgcgtgctgtcccgcgacgaggtgcccaactgcaagctcggcacc
ttggcccgcttcttccggacgtcccacgagccgacgcaccgggccctcgccgacgcccgc
gccaccgtcgaggtgctgcacggcctcatcgagcggatcggctcgttcggcgtcacctcg
ctggaggagatgcgcggcttcgccaaggcccccacgccggagcagcggcgcaagcgccac
ctcgccgacgacgtcccgtccgccccgggcgtctacctgttcgaggacgacgccggcgag
gtcctgtacgtcggcaagagcggcgacctgcgctcgcgggtgcgcaactacttcaccggg
tccgagacgcggtggcgggtccgcgagatggtcgggctcgccgagaacgtccgcacgatc
gagtgcgcgaccgggctggaggccgaggtccgcgagctgcggctcatcgccgagcacaag
ccgcgctacaaccgccgctccaagttccccgagcgggcgatctggctcaagctgaccgtg
gagccgttcccgcggctgtccatcgtccgcgagtgccgcgccgacggcgcccgctacctc
gggccgatctcctcgcgccggcaggccgaggaggcccgcgcggcgctgcacgaggccgtc
ccgctgcggcagtgcacgcagcggctgacgctccggctgatcgagcgcggcacgacgcgc
gcgtgcgcgctcgccgagatcgggcgctgcggcgcgccgtgcgacggccgcgagtccgcc
gacgcctacgccgtgcacgccgggacggcccgctcgatcatggagggcgacgtgcgtccc
gtggtggccgccgcgcaggtccgcatcgaccggctcgcgtccgagctgcgctacgaggag
gccgccgcccagcgcgaccggctcgccgcgttcgtccgcgccgcggcgcgcgggcagcgg
ctcgccgcgctcgcccggctccccgagctggtggcggcccgccccgccttcgacggcggg
tgggagctgtcggtcgtgcggtacggccggctcgccgcggcggggaccgtcccgccgcac
gcccgcccccgcccctacgtcgacgcgctcatcgcgaccgccgagacggtgttcccgccc
gcgggcgaggcgcccggcggcgtcgcgctcggcgcgccgccgtcggccggcgccaccgcc
gaggagatggagtgcgtgctgcgctggctcgacctccccggcgtccggctggtcgaggtc
gacggggcgtggacgtgcccggcgcacggcgccgaagggctgcgcgagtggatcgaccgt
gcctacgacaccggctacgagcggcgggagacgtcccgtcgcggggcgggccgcccacta
aggtga
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