Actinomadura madurae: LUW76_42895
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Entry
LUW76_42895 CDS
T08933
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amaz
Actinomadura madurae
Pathway
amaz03030
DNA replication
amaz03410
Base excision repair
amaz03420
Nucleotide excision repair
amaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LUW76_42895 (polA)
03410 Base excision repair
LUW76_42895 (polA)
03420 Nucleotide excision repair
LUW76_42895 (polA)
03440 Homologous recombination
LUW76_42895 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amaz03032
]
LUW76_42895 (polA)
03400 DNA repair and recombination proteins [BR:
amaz03400
]
LUW76_42895 (polA)
Enzymes [BR:
amaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LUW76_42895 (polA)
DNA replication proteins [BR:
amaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LUW76_42895 (polA)
DNA repair and recombination proteins [BR:
amaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LUW76_42895 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LUW76_42895 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
URN00514
LinkDB
All DBs
Position
9010744..9013434
Genome browser
AA seq
896 aa
AA seq
DB search
MVTTATTPDKRDRLLLLDGHSLAYRAFFALPVENFSTTDGQPTNAVYGFTSMLINVLRDE
QPTHIAVAFDRSEPTFRHEQYVEYKAGRQKTPDEFRSQVSLIFEVLDALRIPRLSVAGFE
ADDIIATLSVQATRAGLRTLIVTGDRDAFQLVNDDVTILYPVRGVSELSRMDPAAVEAKY
GVPPERYRELAALVGESSDNLPGVPGVGPKTAAKWLTKYGDLDTLVARVEEIKGKAGDNL
REHLAGVLRNHQINKLDTEVGLELTPPQLTMGQWDREEIHTLFDSLQFRVLRERLYSSIS
AAEPEADEGFDVEVEALEPGALGTWLEANAGERTGIAVTGTWGRGTGEITALALASKKGP
AVHIDPAELVEDDERALAAYLADPARPKAIHEAKGPMLALAARGMRLEGVTSDTALAAYL
ALPGQRTFDLADLVLRYLHRELRSETEDSGQLTLDGSGEEEAAEALAVRARAVAELADVL
DRDLDKRGATRLLHEVELPLVGVLADMERAGIAVDTDHLAGLSASLGGQVKEQEQQAYAA
VGHDFNLGSPKQVQQVLFDELNLPKTKRTKTGYTTDSEALTTLLGKEPHPVLEHILRWRE
VAKLKSIVDSLIPMADDAGRIHTTFNQMIAATGRLSSTDPNLQNIPIRTAEGRQIREAFV
VGEPYESLLTADYSQIELRIMAHLSEDEALLEAFGSGADFHTITASRVFGLPPEQIDSEL
RARIKAMNYGLAYGLSAYGLSQQLRISPDEARGLMEEYFEQFGGVRDYLRDIVAKARQEG
YTETILGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVASLNVDRALRAAGLA
SRMLLQVHDELVFEVAPGELDELKALVSAEMAGAYALRAPLSVSMGTGRTWQDAAH
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
gtggtgactacggcaacgacccctgacaagcgtgaccggctcctcctgctggacgggcat
tccctggcctaccgggcgttcttcgcgttgcccgtggagaacttctccaccaccgacggg
cagccgaccaacgccgtgtacggcttcacctcgatgctcatcaacgtcctgcgcgacgag
cagccgacccacatcgcggtggcgttcgaccgctccgagccgacgttccggcacgagcag
tacgtcgagtacaaggcggggcggcagaagacgccggacgagttccgcagccaggtcagc
ctgatcttcgaggtgctggacgcgctgcgcatcccgcgcctgtcggtcgccgggttcgag
gccgacgacatcatcgccacgctgtccgtccaggccacgcgggcgggcctgcggaccctc
atcgtcaccggcgaccgcgacgcgttccagctcgtcaacgacgacgtcacgatcctctac
cccgttcgcggcgtgtccgagctgtcccggatggacccggccgccgtcgaggcgaagtac
ggcgtcccgcccgaacggtaccgcgagctcgccgcgctggtgggggagagcagcgacaac
ctgcccggcgtcccgggggtcggcccgaagaccgccgcgaagtggctcaccaagtacggc
gacctcgacaccctcgtcgcccgggtggaggagatcaagggcaaggccggcgacaacctg
cgcgagcacctcgccggcgtgctgcgcaaccaccagatcaacaagctcgacaccgaggtc
ggcctggagctgacgccgccgcagctcaccatgggccagtgggaccgcgaggagatccac
accctgttcgactcgctgcagttccgggtgctccgcgagcggctgtactcctcgatctcc
gcggccgagcccgaggccgacgaaggattcgacgtcgaggtggaggcgctggagcccggc
gcgctcggcacctggctggaggccaacgccggcgagcggaccggcatcgccgtcaccggc
acctggggccgcggcaccggggagatcaccgcgctggcgctggcgtccaagaagggcccg
gccgtccacatcgaccccgccgagctggtcgaggacgacgagcgcgccctcgccgcctac
ctcgccgacccggcccgccccaaggcgatccacgaggccaagggcccgatgctggcgctc
gccgcgcgcggcatgcggctggagggcgtcaccagcgacaccgccctcgccgcctacctc
gcgctgccgggccagcggaccttcgacctcgccgacctcgtcctgcgctacctccaccgc
gagctgcgcagcgagaccgaggactcgggccagcttaccctggacggctccggcgaggag
gaggcggccgaggccctcgcggtccgcgcgcgcgccgtcgccgagctggccgacgtcctc
gacagggacctcgacaagcgcggcgccacccgcctcctgcacgaggtcgagctgccgctc
gtcggcgtcctggccgacatggagcgcgcgggcatcgccgtcgacaccgaccacctcgcc
gggctgtcggcctccctgggcggccaggtcaaggagcaggagcagcaggcctacgccgcc
gtcggccacgacttcaacctgggctcgccgaagcaggtccagcaggtcctgttcgacgag
ctgaacctgcccaagaccaagcgcaccaagaccggctacaccaccgactccgaggccctg
acgaccctcctggggaaggagccgcaccccgtcctggagcacatcctgcgctggcgggag
gtggccaagctcaagagcatcgtcgactcgctcatcccgatggccgacgacgccgggcgc
atccacaccacgttcaaccagatgatcgccgccaccgggcgcctgtcgtccaccgacccg
aacctgcagaacatcccgatccgcaccgccgaggggcggcagatccgcgaggccttcgtc
gtcggcgagccctacgagtccctcctcaccgccgactactcgcagatcgagctgcgcatc
atggcgcacctgtccgaggacgaggcgctcctggaggcgttcggctccggcgccgacttc
cacaccatcaccgcgtcccgcgtcttcggcctgccgcccgagcagatcgactccgagctg
cgcgcccgcatcaaggcgatgaactacggcctcgcctacggcctgtccgcctacggcctg
tcccagcagctccggatctccccggacgaggcccgcggcctcatggaggagtacttcgag
cagttcggcggcgtccgcgactacctgcgcgacatcgtcgccaaggcccgccaggagggc
tacaccgagacgatcctcggccgccgccgctacctgcccgacctcacctccgacaaccgg
cagcgccgcgagatggccgagcggatggccctcaacgcccccatccagggctccgccgcc
gacatcatcaaggtggcgagcctcaacgtcgaccgcgccctgcgcgccgccggcctcgcc
tcccggatgctcctgcaggtccacgacgagctcgtcttcgaggtcgccccgggcgagctg
gacgagctcaaggccctggtcagcgccgagatggccggcgcctacgcgctccgcgcgccc
ctcagcgtctccatgggcaccggccgcacctggcaggacgcggcgcactag
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