Alteromonas macleodii Balearic Sea AD45: AMBAS45_00085
Help
Entry
AMBAS45_00085 CDS
T02253
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amb
Alteromonas macleodii Balearic Sea AD45
Pathway
amb03030
DNA replication
amb03410
Base excision repair
amb03420
Nucleotide excision repair
amb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMBAS45_00085
03410 Base excision repair
AMBAS45_00085
03420 Nucleotide excision repair
AMBAS45_00085
03440 Homologous recombination
AMBAS45_00085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amb03032
]
AMBAS45_00085
03400 DNA repair and recombination proteins [BR:
amb03400
]
AMBAS45_00085
Enzymes [BR:
amb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMBAS45_00085
DNA replication proteins [BR:
amb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AMBAS45_00085
DNA repair and recombination proteins [BR:
amb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AMBAS45_00085
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMBAS45_00085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WH_GTF3C1_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFT93507
LinkDB
All DBs
Position
complement(17747..20539)
Genome browser
AA seq
930 aa
AA seq
DB search
MPDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIKQYNPTHMAV
IFDAKGKTFRDDIYKEYKANRPPMPDELRSQIEPLHAIIKAMGLPVIVESGVEADDVIGT
LAKHATEKGIDTLISTGDKDMAQLVNEHVTLINTMTNQLMDVEGVNTKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDDIYKNLDKIADLSFRGSKSMAAKMQEYE
EQARLSYTLATISIDLDLDYDVETLMPCQADNEQLRDLFAEYEFKRWHAEVSALVAGGDT
SSADANANEEKSDSAEESEQSESVEIDKSKYETVLDEARFNAWVAKLEKAELIAFDTETT
SLNYMDAELVGVSFCIEEGEAAYVPVAHDYPDAPAQLSREFVLDALKPILESDTVIKVGQ
HIKYDKNVLANYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFEEIAGK
GAKQLTFNQISLEEAGPYAAEDADITLRLHNAIWTKLKEIPELKNLLIDVEVPLACVLSR
MEQEGVLIDSQRLRQQSQDLATRIAELESEVHEEAGEPFNLGSTKQLQHVLFEKMSLPII
KKTPKGAPSTSEDVLQELALEYPLPKKIMEYRGLTKLKNTYTDKLPKMINHRTGRVHTSY
HQAVTATGRLSSTDPNLQNIPIRNEEGRRVRQAFVPREGNKFVAADYSQIELRIMAHLSG
DKGLLDAFAHGKDIHKATAAEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLSKQLNI
PRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKGA
ERAAINAPMQGTAADIIKMAMIKVDDWIRKNASDDVTMMMQVHDELVFEIKEDKVETYVS
TITALMESAATLNVPLVVEAGVGENWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattctaaaaagcctccatttattcttgtcgatggatcgtcatatctttttcgt
gcctttcacggtttaccaccattaaccaactcaaaaggccaagacaccggtgctatttat
ggtgttgtgaacatgcttaaaagcttgatcaaacaatacaacccgacgcatatggcggtg
atttttgatgctaaaggcaagacctttcgcgatgacatctataaagagtacaaagcgaac
cgtcctccgatgccggatgagctaagaagccaaatcgaaccgttgcacgccatcattaag
gcaatgggtttacctgttattgttgaatcgggtgtagaagctgatgacgtgattggcacg
ttagccaaacacgccacagaaaaaggtattgatacccttatcagcaccggcgataaagac
atggcgcagctagtaaatgaacatgtcaccttaatcaacaccatgacaaaccaactgatg
gatgtcgaaggtgtaaatacgaagtttggtattccaccggagcttgtgatcgacttcctt
gcgcttaagggcgataaagtcgataacatcccaggtgtacctggtgtaggcgataaaagt
gctcaagccttgttaaacggtattggcggtatcgacgacatatataagaacctggataaa
attgcagatctgtcgtttagaggcagtaagtcgatggcggctaaaatgcaggaatacgaa
gagcaagctcggctttcttataccctagctactatcagtatcgatcttgaccttgactac
gacgttgagacgttaatgccgtgtcaggccgataacgaacaacttcgcgatctgtttgcc
gaatacgagttcaaacgctggcacgcggaagtaagcgcgcttgtagccggcggagatacc
tctagtgccgacgcaaacgccaacgaggaaaagagcgatagcgcagaagagagcgaacaa
agtgaatcggtagagatagataagtcgaagtatgagaccgtgcttgatgaggcgcgtttt
aacgcttgggtagcgaagctagaaaaagccgaactcatcgcttttgataccgagacaacc
agccttaactacatggatgcggagttagttggtgtttcattttgtatagaggaaggtgaa
gctgcttatgtgcctgttgctcacgattatccagatgcacccgcccagctatcacgggaa
tttgtattagacgcactaaagcctattttagaatcggacaccgtgatcaaagtaggccaa
cacataaaatacgacaaaaatgtgttagcgaactatgacattaccttaaacggcattggc
tttgacaccatgcttgagagctatgtactaaacagtactgcgcagcgccatgatatggac
tcacttgccctagcctaccttggtcataaaactattcactttgaagagattgcgggtaaa
ggcgcaaaacagctaacgtttaatcaaattagccttgaagaagctgggccttatgccgca
gaagatgctgacattacgcttcgcttacacaacgctatttggactaagttgaaagaaatt
cctgagcttaaaaatctattgatagatgttgaggttcccctagcctgcgtactttctcgt
atggaacaggaaggtgtattgatagacagccaaagactgcgtcagcaaagccaagatctt
gccacacggattgccgaacttgaaagtgaagtacatgaggaagctggcgagccattcaac
ttaggttctactaagcagcttcaacatgtcttgttcgaaaaaatgtcgttaccgatcata
aagaaaacgcctaaaggagcgccgtctacttctgaggacgtattgcaagaacttgcgctt
gagtacccgttgccgaagaagatcatggaataccgtggcctaaccaagctaaagaatacc
tacacggataaacttcctaagatgatcaatcatcgtacgggtcgagtgcatacttcttat
caccaagcagtaaccgccacgggacgactctcttccaccgatcctaacttacagaacatc
cctatccgaaatgaggaaggtcgccgcgtacgtcaggcatttgtaccaagagaaggaaat
aagttcgtcgcagccgactactcacaaattgagctgcgcattatggcgcacctttctggc
gataaaggtctgttagatgcctttgcgcatggtaaagatattcataaagcaaccgcagcg
gaagtttttggtgtgccacttgatgaagtaaccactgaacagcgtcgcagtgcaaaagcg
attaactttggcttaatttacggtatgagtgcctttggattgtcgaagcaacttaatatt
ccacgtaatgaagcacaaaaatatatggatctttacttcgagcgctacccaggcgtgctt
gagtacatggattcaacacgtgagagcgcgaaagaaaaaggttatgtagaaaccgtattt
ggtcgcagactttatttgcctgatattaaagccagtaatggtgcacgtagaaaaggcgca
gagcgcgcagcgataaacgcgcctatgcaaggcacagcggcagacattattaagatggca
atgatcaaagttgatgactggattaggaaaaatgcatctgatgatgtgacaatgatgatg
caggtgcacgatgaattggtttttgagataaaagaagacaaagtggaaacctatgtctct
actattactgctcttatggaaagcgcagctacgctaaatgttccgctggttgttgaggca
ggtgtgggcgaaaactgggatgaagcgcactag
DBGET
integrated database retrieval system
