Alteromonas macleodii Balearic Sea AD45: AMBAS45_03495
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Entry
AMBAS45_03495 CDS
T02253
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
amb
Alteromonas macleodii Balearic Sea AD45
Brite
KEGG Orthology (KO) [BR:
amb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amb03009
]
AMBAS45_03495 (rumA)
Enzymes [BR:
amb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AMBAS45_03495 (rumA)
Ribosome biogenesis [BR:
amb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AMBAS45_03495 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltr_RsmB-F
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_15
MTS
SAM_MT
Motif
Other DBs
NCBI-ProteinID:
AFT94179
LinkDB
All DBs
Position
806639..808099
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AA seq
486 aa
AA seq
DB search
MANLFKQSRSKQKGKTSLTERGASKKGNARANAQVAGLRFGKSKKAADTSESQKPNTVTI
EDLDWMGNGVVRGNPMVFVEGALVGETCDIEVVSSKKKVINARATNIHSPSDERQAPFCP
VFDVCGGCQLQHIKPDAALEQRDRALKVMMERHLAMKPHVWQAPLAGPRPQYRRKARLAI
DARNPNQIKLGFREASSSNVINVETCPILVDPLSKLIGPLRDALTGFESARHIGHISLIA
GDNTSHLVIKHIKALEAELIDAVSELVNTSSSVGVYGIELKLENKQGQIRSVGRGTDMVM
NTVNGCSISPSANDFIQINKVVNEKMVNQAIGWLNPKSNERIADWFSGLGNFTLPIAKLG
AKVQAVEGVAEMVRRAKDNAQQQGIENVEWLHLDLADKTNVEASLQLGFDKVLLDPSREG
ALTVCHALVKALPKTIVYVSCNPSTFSRDAKVLIDGGYEMEKAGVAEMFPFTHHMEMMAL
FTRKQQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaacctttttaaacaatctcgcagcaagcaaaaaggcaaaacgtcgcttactgag
cgtggcgcttcaaaaaaagggaatgccagagccaacgcgcaggtcgcaggacttcgattt
gggaaaagcaaaaaagcagcggataccagtgaaagtcaaaaacctaacacggtcaccatt
gaagatttagactggatgggcaatggcgtagtgcgcggcaatccgatggtatttgttgaa
ggtgcccttgtaggagaaacctgcgacatagaggtggtatctagcaaaaagaaagtcatt
aacgccagggcgacaaacattcattcgccaagtgatgaaagacaagcgcctttttgccct
gtgtttgatgtatgtggtgggtgtcagctacagcacataaagcctgacgctgcgcttgag
caacgtgaccgtgctcttaaagtgatgatggaacgtcatcttgcaatgaagccacacgtt
tggcaagcacctttagcagggcctcgccctcaatatcgcagaaaagcaaggctggctata
gatgcccgcaaccccaatcaaattaagttgggctttcgtgaagcaagtagcagtaacgtt
atcaatgtagaaacctgcccaatactggtcgacccgctatctaaacttattggcccttta
cgagatgcgcttacagggttcgagtcagcgcgtcatattggacatatcagccttattgca
ggcgacaacacctcgcatcttgttattaaacacatcaaagcccttgaagcggagcttatt
gatgcagtgagcgaattggtgaacacgagttcatcagttggtgtctacggtattgaatta
aagcttgaaaataagcaggggcaaattcgcagtgtgggccgtggtactgatatggtgatg
aacacggtaaatggctgctcaatttcacctagtgctaacgactttattcaaattaataaa
gtggttaacgaaaaaatggttaatcaggcaataggatggctaaacccaaagtctaacgaa
cgtatcgctgattggtttagcgggctgggcaattttactttacctattgctaagttaggt
gcaaaggttcaggcggtagaaggtgtggcagagatggtgcgccgcgccaaagacaatgca
cagcaacagggcattgaaaatgtagagtggctgcatttagatttggctgataagaccaac
gtcgaggcttcattacagctgggctttgataaggtactactagacccctcaagagaaggg
gcgttgaccgtttgtcatgcgcttgtaaaagcactaccaaaaacgatagtgtatgtttct
tgcaacccaagtacgttttctagagacgcgaaggtgttgatagacggaggttatgaaatg
gaaaaagcgggcgtagcagaaatgttccccttcacccatcacatggaaatgatggccttg
tttacgcgaaagcagcagtaa
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