| Entry |
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| Name |
(GenBank) DNA polymerase III subunit alpha
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| KO |
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| Organism |
amb Alteromonas macleodii Balearic Sea AD45
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:amb00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMBAS45_04775
03430 Mismatch repair
AMBAS45_04775
03440 Homologous recombination
AMBAS45_04775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:amb03032]
AMBAS45_04775
03400 DNA repair and recombination proteins [BR:amb03400]
AMBAS45_04775
Enzymes [BR:amb01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMBAS45_04775
DNA replication proteins [BR:amb03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMBAS45_04775
DNA repair and recombination proteins [BR:amb03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMBAS45_04775
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1110464..1113928
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| AA seq |
1154 aa
MSSPFIHLRVHSDFSMMDGLNKVKPILGKVAALGMPAVAITDQMNMCGLVKFYSEAHNLG
IKPIIGTDFWVTNEVFGDEPFRLTLIAMNNEGYKNITILISKAYLRGHLAHRAVIDQEWL
AEHSEGVIVLSGAQQGDIGVGLMKNNAKILDSALEFYQTHFPDRFYLELIRTGRQGEEDY
LHLAVELAEQRGLPVVATNEVCFIDQEGFEAHEIRVCIHDGYTLDDTRRPKRYSDQQYLR
TAEEMVELFSDIPEALENTVEIAKRCNVTVRLNEYFLPQFPTGGMTTEDFLVKVSEEGLE
ERLEFLFPDEEVRKAKRPEYDDRLRIELEVINQMGFPGYFLIVMEFIQWSKDNGIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAEL
YGRQAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFKAEPQL
PEVYESDEEVKDLIDMARILEGVTRNAGKHAGGVVIAPTTITDFSPLYCDDEGKNPVTQF
DKNDVETAGLVKFDFLGLRTLTIIQWAIDMIKEGKNVDVDISAIPLEDPKSFRTLQNAET
TAVFQLESRGMKELIKRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEISYPD
AEYQHECLKEILEPTYGIILYQEQVMQIAQEMAGYSLGGADLLRRAMGKKKPEEMAKQRG
TFAEGAKGNNIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKVHYPAEFMAA
VMSADMDNTDKIVTLVDECERMGIEILPPDLNAGKYKFTVDSEGRIVYGIGAIKGVGEGP
IEAIIEARETQGAFKDLFDFCAKIDIKRVNKRVLEKLVLAGAMDNLGPHRASLMASLPEA
LAAAGQHAKAESFGQSDMFGLLTTEPEDVKQAFADVPEWPEKVWLEGEKDTLGLYLTGHP
INQYAEELRYYTDGRLVDLKPTNKDQMASAVGLVLGVRVMTNKRGRRWAIVTLDDKSARI
DVRFFPDMYEQFESVLETDRILLIKGQVSFDDFSGGNTITARDVMDIVQAREKNARALAL
NIDTQLLEPKKMSQMQSILQAFNGGSCPVQLVVTHPDAEVILACGARWYVTPEDQLLHDL
KQCLGDKAVSILYH |
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| NT seq |
3465 nt +upstreamnt +downstreamnt
atgtcatcgccatttattcatttacgtgttcacagcgacttttcgatgatggacggcctg
aataaggttaaacctattctaggtaaagtggccgcgcttggcatgcctgccgtggcgatc
accgaccaaatgaatatgtgtggcttggtaaagttttattccgaggcacataacttaggt
attaagcccatcatcggcaccgatttttgggtgaccaatgaagtctttggcgatgaacct
ttcaggctaacccttattgcaatgaacaatgagggatataagaacattacaattcttatc
tccaaggcctaccttcgtggacacttggcacaccgtgcggttatcgatcaagaatggtta
gcagagcatagtgaaggtgtgattgttttatcgggtgcacagcaaggcgatattggcgta
ggtttaatgaaaaacaacgccaaaattctagatagtgcccttgagttttatcaaacccat
tttcctgaccgcttttatttagagctgattagaaccggtaggcaaggtgaagaggattac
ttacaccttgccgtagagcttgctgagcagcgcgggttacccgtagtagccacgaacgaa
gtatgctttattgaccaagagggtttcgaggctcacgaaattcgagtgtgtattcacgac
ggctatacgcttgatgatacccgccgtcctaaacgatacagcgaccagcagtaccttcgc
actgctgaagaaatggttgagttatttagcgatattcctgaagccttagaaaatacggtt
gaaattgctaagcgctgtaacgttactgtacggttaaacgaatacttcttgccgcaattt
ccaaccggcggcatgaccaccgaagacttcttggttaaggtgtctgaagaggggttggaa
gaacgtctagaatttctatttcccgatgaagaagtgcgcaaagcgaaacgtccagagtac
gatgaccgacttcgcattgagcttgaagttatcaaccaaatgggtttcccaggctacttc
cttattgtaatggagttcattcagtggagtaaggataacggaattccggtagggccaggg
cggggttctggtgcgggttcactggtggcttatgccctaaaaattaccgacctagacccg
cttgaattcgacttgctattcgaacgtttcttgaacccagagcgtgtatccatgcccgac
ttcgacgtcgacttctgtatggatagacgagacgaggtaatcgaccacgttgctgagctt
tacggacgtcaggcggtatcgcagatcattacgtttggtactatggcggcaaaagcggta
gtgcgcgacgtaggccgcgtgcttggtcacccatacggctttgtagacagaatctcaaag
cttattccaccagatccaggcatgacgcttgaaaaggcgtttaaagcagagccacagcta
ccagaagtgtatgaaagcgatgaggaagtgaaagaccttatcgatatggcgcgaatactt
gaaggggttacccgaaatgccggtaagcacgccggtggtgttgttattgcgccaaccaca
attactgatttctcgcctttgtattgtgatgacgaaggtaaaaaccccgtaacccagttc
gacaaaaacgacgttgaaacggcgggcttggtaaaattcgatttcttaggtcttcgtacg
ctgaccattattcagtgggcaatagatatgatcaaagaagggaagaacgttgatgtcgat
atcagcgctattccgcttgaagatcctaagagtttcagaacccttcaaaacgccgagaca
actgcggtattccagctggaatctcgcggtatgaaagaactaattaagcgccttaaacct
gactgcttcgaagatattatcgcactggtggccctgttccgtccgggcccgctgcaatca
ggcatggtagataactttattgaccgaaagcacggacgtgaagaaatttcctaccccgat
gctgaatatcagcacgagtgcttgaaagaaattctagagcctacctatggcattatcttg
tatcaggaacaggtaatgcagatagcccaggaaatggcgggctactcactgggcggcgct
gacttgcttcgtcgtgctatgggtaagaaaaagcctgaagaaatggcgaagcagcgcggc
acgttcgccgaaggtgccaagggcaataatattgacccagacctagcgatgaaaatcttc
gacttggtagaaaagttcgcgggttacgggtttaacaaatctcactctgccgcttacgcg
ttggtgtcttatcaaactttgtggctgaaagtgcattatccagcggaattcatggctgcg
gtaatgtcggcagatatggataacaccgataaaatcgtgacgcttgtcgatgaatgtgag
cgcatgggtattgagatactgccgccagatttaaatgcgggtaaatacaaatttaccgtc
gatagcgaaggtcgcattgtttacggtatcggtgcgattaaaggggtaggtgaaggccca
attgaagcgattattgaagcgcgggagacccaaggggcatttaaggatctatttgatttc
tgcgccaagatagacattaaacgggtaaacaagcgagtgctagaaaagctagtattagcg
ggggcaatggacaacttaggcccccatcgcgctagtcttatggcgagtttacccgaggcc
cttgccgccgctggacagcatgcaaaagccgagtcgtttggtcagtcagacatgtttggc
ctactgactaccgagccagaagacgtgaagcaagcgtttgccgatgtccctgagtggcct
gaaaaagtatggctagaaggtgaaaaagacaccctaggcttgtacttaaccggccacccc
atcaatcagtacgcggaagaactgcgttactacaccgacggtcgattagttgatttaaaa
ccaaccaacaaagaccaaatggccagtgcagtaggactggtgcttggcgttcgtgttatg
acgaacaagcggggtcgtcgctgggccatagtgacactggatgataagagtgccagaata
gacgtacgtttcttccccgatatgtacgaacagtttgaaagtgtgttagaaactgacaga
atattgcttataaagggacaggtcagctttgatgatttctctgggggcaatacaatcacc
gcccgtgatgtaatggacattgttcaggcacgagagaaaaacgcgagagcgctggcactt
aatattgatacccagctgcttgaaccgaagaaaatgagtcagatgcaatctatcctgcag
gcatttaacggcggaagttgtcctgttcagttagtggtaacccatccagacgctgaagta
atcttagcgtgtggtgcaagatggtacgttacccctgaagaccaacttttgcacgatctc
aaacaatgtttgggagacaaagccgtttcaattctctaccattaa |
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