Alteromonas macleodii Balearic Sea AD45: AMBAS45_04775
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Entry
AMBAS45_04775 CDS
T02253
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amb
Alteromonas macleodii Balearic Sea AD45
Pathway
amb03030
DNA replication
amb03430
Mismatch repair
amb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMBAS45_04775
03430 Mismatch repair
AMBAS45_04775
03440 Homologous recombination
AMBAS45_04775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amb03032
]
AMBAS45_04775
03400 DNA repair and recombination proteins [BR:
amb03400
]
AMBAS45_04775
Enzymes [BR:
amb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMBAS45_04775
DNA replication proteins [BR:
amb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMBAS45_04775
DNA repair and recombination proteins [BR:
amb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMBAS45_04775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFT94433
LinkDB
All DBs
Position
1110464..1113928
Genome browser
AA seq
1154 aa
AA seq
DB search
MSSPFIHLRVHSDFSMMDGLNKVKPILGKVAALGMPAVAITDQMNMCGLVKFYSEAHNLG
IKPIIGTDFWVTNEVFGDEPFRLTLIAMNNEGYKNITILISKAYLRGHLAHRAVIDQEWL
AEHSEGVIVLSGAQQGDIGVGLMKNNAKILDSALEFYQTHFPDRFYLELIRTGRQGEEDY
LHLAVELAEQRGLPVVATNEVCFIDQEGFEAHEIRVCIHDGYTLDDTRRPKRYSDQQYLR
TAEEMVELFSDIPEALENTVEIAKRCNVTVRLNEYFLPQFPTGGMTTEDFLVKVSEEGLE
ERLEFLFPDEEVRKAKRPEYDDRLRIELEVINQMGFPGYFLIVMEFIQWSKDNGIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAEL
YGRQAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFKAEPQL
PEVYESDEEVKDLIDMARILEGVTRNAGKHAGGVVIAPTTITDFSPLYCDDEGKNPVTQF
DKNDVETAGLVKFDFLGLRTLTIIQWAIDMIKEGKNVDVDISAIPLEDPKSFRTLQNAET
TAVFQLESRGMKELIKRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEISYPD
AEYQHECLKEILEPTYGIILYQEQVMQIAQEMAGYSLGGADLLRRAMGKKKPEEMAKQRG
TFAEGAKGNNIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKVHYPAEFMAA
VMSADMDNTDKIVTLVDECERMGIEILPPDLNAGKYKFTVDSEGRIVYGIGAIKGVGEGP
IEAIIEARETQGAFKDLFDFCAKIDIKRVNKRVLEKLVLAGAMDNLGPHRASLMASLPEA
LAAAGQHAKAESFGQSDMFGLLTTEPEDVKQAFADVPEWPEKVWLEGEKDTLGLYLTGHP
INQYAEELRYYTDGRLVDLKPTNKDQMASAVGLVLGVRVMTNKRGRRWAIVTLDDKSARI
DVRFFPDMYEQFESVLETDRILLIKGQVSFDDFSGGNTITARDVMDIVQAREKNARALAL
NIDTQLLEPKKMSQMQSILQAFNGGSCPVQLVVTHPDAEVILACGARWYVTPEDQLLHDL
KQCLGDKAVSILYH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgccatttattcatttacgtgttcacagcgacttttcgatgatggacggcctg
aataaggttaaacctattctaggtaaagtggccgcgcttggcatgcctgccgtggcgatc
accgaccaaatgaatatgtgtggcttggtaaagttttattccgaggcacataacttaggt
attaagcccatcatcggcaccgatttttgggtgaccaatgaagtctttggcgatgaacct
ttcaggctaacccttattgcaatgaacaatgagggatataagaacattacaattcttatc
tccaaggcctaccttcgtggacacttggcacaccgtgcggttatcgatcaagaatggtta
gcagagcatagtgaaggtgtgattgttttatcgggtgcacagcaaggcgatattggcgta
ggtttaatgaaaaacaacgccaaaattctagatagtgcccttgagttttatcaaacccat
tttcctgaccgcttttatttagagctgattagaaccggtaggcaaggtgaagaggattac
ttacaccttgccgtagagcttgctgagcagcgcgggttacccgtagtagccacgaacgaa
gtatgctttattgaccaagagggtttcgaggctcacgaaattcgagtgtgtattcacgac
ggctatacgcttgatgatacccgccgtcctaaacgatacagcgaccagcagtaccttcgc
actgctgaagaaatggttgagttatttagcgatattcctgaagccttagaaaatacggtt
gaaattgctaagcgctgtaacgttactgtacggttaaacgaatacttcttgccgcaattt
ccaaccggcggcatgaccaccgaagacttcttggttaaggtgtctgaagaggggttggaa
gaacgtctagaatttctatttcccgatgaagaagtgcgcaaagcgaaacgtccagagtac
gatgaccgacttcgcattgagcttgaagttatcaaccaaatgggtttcccaggctacttc
cttattgtaatggagttcattcagtggagtaaggataacggaattccggtagggccaggg
cggggttctggtgcgggttcactggtggcttatgccctaaaaattaccgacctagacccg
cttgaattcgacttgctattcgaacgtttcttgaacccagagcgtgtatccatgcccgac
ttcgacgtcgacttctgtatggatagacgagacgaggtaatcgaccacgttgctgagctt
tacggacgtcaggcggtatcgcagatcattacgtttggtactatggcggcaaaagcggta
gtgcgcgacgtaggccgcgtgcttggtcacccatacggctttgtagacagaatctcaaag
cttattccaccagatccaggcatgacgcttgaaaaggcgtttaaagcagagccacagcta
ccagaagtgtatgaaagcgatgaggaagtgaaagaccttatcgatatggcgcgaatactt
gaaggggttacccgaaatgccggtaagcacgccggtggtgttgttattgcgccaaccaca
attactgatttctcgcctttgtattgtgatgacgaaggtaaaaaccccgtaacccagttc
gacaaaaacgacgttgaaacggcgggcttggtaaaattcgatttcttaggtcttcgtacg
ctgaccattattcagtgggcaatagatatgatcaaagaagggaagaacgttgatgtcgat
atcagcgctattccgcttgaagatcctaagagtttcagaacccttcaaaacgccgagaca
actgcggtattccagctggaatctcgcggtatgaaagaactaattaagcgccttaaacct
gactgcttcgaagatattatcgcactggtggccctgttccgtccgggcccgctgcaatca
ggcatggtagataactttattgaccgaaagcacggacgtgaagaaatttcctaccccgat
gctgaatatcagcacgagtgcttgaaagaaattctagagcctacctatggcattatcttg
tatcaggaacaggtaatgcagatagcccaggaaatggcgggctactcactgggcggcgct
gacttgcttcgtcgtgctatgggtaagaaaaagcctgaagaaatggcgaagcagcgcggc
acgttcgccgaaggtgccaagggcaataatattgacccagacctagcgatgaaaatcttc
gacttggtagaaaagttcgcgggttacgggtttaacaaatctcactctgccgcttacgcg
ttggtgtcttatcaaactttgtggctgaaagtgcattatccagcggaattcatggctgcg
gtaatgtcggcagatatggataacaccgataaaatcgtgacgcttgtcgatgaatgtgag
cgcatgggtattgagatactgccgccagatttaaatgcgggtaaatacaaatttaccgtc
gatagcgaaggtcgcattgtttacggtatcggtgcgattaaaggggtaggtgaaggccca
attgaagcgattattgaagcgcgggagacccaaggggcatttaaggatctatttgatttc
tgcgccaagatagacattaaacgggtaaacaagcgagtgctagaaaagctagtattagcg
ggggcaatggacaacttaggcccccatcgcgctagtcttatggcgagtttacccgaggcc
cttgccgccgctggacagcatgcaaaagccgagtcgtttggtcagtcagacatgtttggc
ctactgactaccgagccagaagacgtgaagcaagcgtttgccgatgtccctgagtggcct
gaaaaagtatggctagaaggtgaaaaagacaccctaggcttgtacttaaccggccacccc
atcaatcagtacgcggaagaactgcgttactacaccgacggtcgattagttgatttaaaa
ccaaccaacaaagaccaaatggccagtgcagtaggactggtgcttggcgttcgtgttatg
acgaacaagcggggtcgtcgctgggccatagtgacactggatgataagagtgccagaata
gacgtacgtttcttccccgatatgtacgaacagtttgaaagtgtgttagaaactgacaga
atattgcttataaagggacaggtcagctttgatgatttctctgggggcaatacaatcacc
gcccgtgatgtaatggacattgttcaggcacgagagaaaaacgcgagagcgctggcactt
aatattgatacccagctgcttgaaccgaagaaaatgagtcagatgcaatctatcctgcag
gcatttaacggcggaagttgtcctgttcagttagtggtaacccatccagacgctgaagta
atcttagcgtgtggtgcaagatggtacgttacccctgaagaccaacttttgcacgatctc
aaacaatgtttgggagacaaagccgtttcaattctctaccattaa
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