Alteromonas macleodii Balearic Sea AD45: AMBAS45_05885
Help
Entry
AMBAS45_05885 CDS
T02253
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
amb
Alteromonas macleodii Balearic Sea AD45
Pathway
amb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMBAS45_05885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amb03400
]
AMBAS45_05885
DNA repair and recombination proteins [BR:
amb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMBAS45_05885
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMBAS45_05885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
EcpC_N
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AFT94655
LinkDB
All DBs
Position
1374737..1376752
Genome browser
AA seq
671 aa
AA seq
DB search
MSRGFELHSKYKPAGDQPKAIEALVDGLESGLAGQTLLGVTGSGKTFTMANVIKEVQRPT
LILAHNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDHIE
QMRLSATKALMERRDVVIVASVSAIYGLGDPESYMKMLLHLRQGDTMDQRDILRRLAELQ
YKRNDLAFERGTFRVRGDVIDIFPADSEKQAVRVELFDDEIDKISLFDPLTGAVDKSVIR
ATVFPKTHYVTPREKILNAIEHIKEELGDRKKQLQEANKLIEEQRISQRTQFDIEMMMEL
GYCSGIENYSRYLSGRAPGEPPPTLLDYFPADGLMFIDESHVTVSQVGAMYRGDRSRKET
LVEFGFRLPSALDNRPLKFEEFEQICPQTIYVSATPGDYELKKTDGEIVEQVVRPTGLLD
PVIEVRPVATQVDDVLSEIQKRVELDERVLITTLTKRMAEDLSEYLNEHGVKVRYLHSDI
DTVERIEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRAERSLIQTIG
RAARHVNGKAILYADSITKSMKKAMDETERRREKQMAHNEANGITPMRLNKPITDIMDLG
DSAHPASGKVRLRKVEEKKKQQKTASATELMDQITELEKQMFEYARELEFEKAASLRDDI
EALRKQVVTLS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtagagggtttgagcttcattctaaatacaagccagcaggcgaccagccaaaagca
atagaagctttggtggatggtctagaaagtggcttggccggccaaacactgcttggtgtt
acggggtcgggtaaaacctttaccatggctaatgtcattaaagaagtgcagagaccaacg
cttattcttgcacacaacaaaaccttagcggctcagctttacggtgagatgaaagaattc
ttccccaataacgccgtagagtacttcgtttcatattacgattattatcagccagaagcc
tacgttccaagtaccgatacctttattgagaaagacgcgtcaatcaatgatcatattgaa
caaatgcgactgtccgccactaaagcgttgatggagcgcagagacgtggtcattgtagcg
agtgtgtcggctatttatggtttgggggaccctgaatcttacatgaagatgctattgcat
cttcgccagggcgacaccatggaccaacgtgacattttacgtcgccttgcagaactgcag
tacaagcgtaacgatttagcgtttgaaaggggtacgtttcgtgtgcgaggcgatgttata
gatatcttccctgcggactctgaaaagcaagccgtaagggtcgagctttttgacgatgag
atagataaaattagtctgttcgacccgctaaccggggctgtcgataagtcagttattcga
gcaacggtttttcctaaaacgcactatgtaacccctcgagagaaaatcctcaatgctatt
gagcatatcaaggaagaacttggcgatcgtaaaaagcaacttcaagaggcgaataagctg
atagaagagcagcgtatttcacagcgcacccagttcgatatcgaaatgatgatggagctt
ggctattgttccggaatcgagaattactctcgctatctttcaggaagagctccgggcgaa
ccacctccaaccttattggactattttccagcagatggcctaatgtttatcgatgagtct
cacgtaacggtctctcaagtaggggcaatgtatcgcggggatcgctctagaaaagagacc
ttggtggagtttggtttcaggctgccgtcggcgttggacaatcgtccgcttaagtttgaa
gagtttgaacagatttgcccccaaaccatctatgtttctgcgacgccaggcgattatgaa
ttaaagaaaactgacggtgagatagtagagcaggttgtgcgtccaacgggcctgctagac
cctgttattgaagtacgtcctgtagccactcaggttgatgatgtcctgtctgaaatacaa
aaacgggtcgagcttgacgaacgtgtgcttattactaccttaaccaagcgtatggctgaa
gatttaagcgagtatttaaatgagcacggcgttaaagttcgttatctgcattcggatatc
gatacagtagagcgaattgaaataatccgagacttgcgactgggtaaattcgacgtgttg
gttggtattaacctgttacgtgaaggtctagatatgccggaagtgtcgctggtggcgatt
ttagatgccgacaaagaaggctttttgcgcgctgaacgttcgttaatccagactattggt
agagccgcgcgtcacgtgaatggtaaagctattttgtacgctgacagtattaccaagtcg
atgaaaaaagcgatggacgagactgaacgccgtcgtgagaagcaaatggcgcataatgag
gcaaatggtataacgccgatgcgacttaacaagcctattaccgatattatggacttaggc
gacagcgcgcaccctgcgtctggaaaagtcagactgcgcaaagttgaagagaagaagaag
caacagaaaacagcaagtgctactgaattaatggaccaaatcacggagcttgaaaagcag
atgtttgaatatgcgcgtgagcttgagtttgaaaaagcagcatcattgcgtgacgatatt
gaagcacttcgaaagcaggttgttacactctcttaa
DBGET
integrated database retrieval system
