Alteromonas macleodii Balearic Sea AD45: AMBAS45_06280
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Entry
AMBAS45_06280 CDS
T02253
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
amb
Alteromonas macleodii Balearic Sea AD45
Pathway
amb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AMBAS45_06280 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amb03400
]
AMBAS45_06280 (ruvB)
Enzymes [BR:
amb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMBAS45_06280 (ruvB)
DNA repair and recombination proteins [BR:
amb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMBAS45_06280 (ruvB)
RecFOR pathway proteins
AMBAS45_06280 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_14
Mg_chelatase
AAA_3
AAA_16
nSTAND3
RNA_helicase
AAA_18
Rad17
NTPase_1
AAA_17
TIP49
NB-ARC
Bac_DnaA
AAA_2
AAA_28
Sigma54_activ_2
AAA_24
ABC_tran
TsaE
NPHP3_N
CagL
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AFT94734
LinkDB
All DBs
Position
1472240..1473244
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLITPEASTEDEVIDRAIRPKMLEDYTGQPHVCEQMEIFIQAARNRDDALDHLLI
FGPPGLGKTTLANIVANEMGVNIKTTSGPVLEKAGDLAALLTNLERNDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYNVKDLTSIVARSASYLNLEMNEEGAQEVARRSRGTPRIANRLLRRVRDYAEIKSDG
TVGADVAAKALDMLDVDKEGFDYMDRKLLTAIIEKFDGGPVGLDNLAAAIGEEKETIEDV
IEPFLIQQGFLQRTPRGRIVSQRAYLHFGFAPSQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgacagactgattacgcctgaagcaagcaccgaagacgaggtcatcgac
cgcgccattcgccctaaaatgctggaagactatacggggcagcctcacgtatgtgagcaa
atggaaatttttattcaagctgcgcgtaatcgcgacgatgcgctagaccatctacttatt
ttcggtccgccaggactgggtaaaaccacgcttgcaaatattgtagcaaatgaaatgggc
gtgaacattaaaaccacgtcaggccctgtgcttgagaaagctggggatttggccgcacta
cttaccaaccttgagcgcaacgatgtattgttcatagacgaaatacatcgcttgagccca
gtggtagaggaaattctttatcctgccatggaagactaccagcttgatattatgataggc
gaggggcctgccgcccgttcaattaagctagatcttcctccttttacgctggtaggtgct
accacccgcgcaggctcgctaacgtcgccgttacgcgaccgtttcggtattgtacaacgc
ctggaattttacaatgtaaaagacctcaccagtattgtggcaagaagcgccagctacctt
aatttagaaatgaatgaggaaggcgcacaagaagtggcacgtcgctcgcggggcacgccg
cgtattgccaatcgtttattacgccgtgttcgagattatgccgagattaaatctgatggt
accgtaggcgctgatgtcgctgctaaagccctcgatatgcttgatgtagacaaagaaggt
tttgattacatggaccgcaaattgcttactgctattatcgaaaagtttgatggtggacca
gtagggctagataatttggcggcggccattggggaagaaaaagaaaccatagaagacgtg
attgaacccttccttattcagcagggctttttacagcgcacgcctcgaggccgtattgtg
tcgcagcgcgcttatcttcattttggtttcgctccgtcacaatag
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