Alteromonas macleodii Balearic Sea AD45: AMBAS45_11565
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Entry
AMBAS45_11565 CDS
T02253
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
amb
Alteromonas macleodii Balearic Sea AD45
Pathway
amb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AMBAS45_11565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amb03400
]
AMBAS45_11565
Enzymes [BR:
amb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AMBAS45_11565
DNA repair and recombination proteins [BR:
amb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMBAS45_11565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
AAA_22
SLFN-g3_helicase
UvrD-helicase
UvrD_C
SH3_13
RecD_N
PhoH
DEAD
nSTAND3
ResIII
Flavi_DEAD
AAA_16
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFT95778
LinkDB
All DBs
Position
complement(2692209..2694434)
Genome browser
AA seq
741 aa
AA seq
DB search
MKSNQHSVPSFFDNLFGIEAIDKFVAKEFGFIDELEQEEQFIWAGILAYLSYMQRNGHSC
IYLKDIAGTTLFKEVVAEQEEVLAAEKNEHSSNAVAAASLTLVEQTEQEKAPKAGVDVPQ
LTPLLRIVKSAVVNEQVAQLFVYSNGKLYSRRYYEFEQEVARNVVERAALTPLSDKASEK
VKQLWPAIFPTETTDRQDWQQIAVAKSLMQRFCVINGGPGTGKTYTVLRLLLALQACDEN
LKIVLAAPTGKAQQRMTESIMNSIDGLRGKLDDTVLNNVPTDAVTLHRLLGLREHGVSTK
FNQHNQLSADVLIVDEASMVDLALMTRIVRALPDHARLYFIGDADQLPAVELGNVLEQLV
STETASFDDNANVPNGTNSAHSSLSLNNHDDGLSLGGVPSLMRQHIATLCPHLPLLPVDE
HAKSYVATLQAPQRFKGQVAKVATAIQRGDASGALAAITDKTGDNNESAGLGSNIDSNPG
SNTASRLQSGVHLWPEYQVSGRDLHQLAKESFLPIFDAGSAEEALNRLNVVRWLTPVRKG
AMGVEGLNNLVFDAIKHKIRKREGHFYQGQPIMIVKNHHPQRLSNGEVGVIWPDSKGKLY
AWFYQDSQASGQNGSSQKASANAGDSADKTLEQKQALRSISLSRVPQFETVYAMTIHKSQ
GSEFNHVVLILPKPDSEKAANLFHRGLVYTGLTRAKDGCLIISDNATFSHMVQRVDKRYS
GLSEAISLHLESTSNATPEVE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaatcaacactctgtaccgtcattttttgataacttgtttggcatcgaggcg
atcgacaaatttgtcgcaaaagaatttggctttattgatgaactggagcaagaagaacag
tttatttgggctgggatcttagcgtatttgtcgtatatgcagcgcaatggccacagctgt
atctatcttaaagacatagcgggtacgacgctttttaaagaggtagtcgcagaacaagag
gaagtcttggcggccgaaaaaaatgagcatagcagtaacgcggtggcggctgcttcactg
acactggttgaacaaaccgagcaggaaaaagcgcccaaagcaggtgtcgacgtgccacaa
ctaacaccgttacttagaattgtaaaaagcgcagtggttaacgagcaggtggctcaacta
tttgtctatagcaacggcaagctgtacagccgtcgctactatgagtttgaacaagaagta
gcacgaaatgttgtagaacgagcggcgcttacgcccttaagtgataaagctagcgaaaaa
gtaaagcaactttggccagcaatctttcctaccgaaacaaccgatcggcaagattggcag
caaatagcggtggcgaaaagcctaatgcagcgtttttgcgttataaacggtgggccagga
acaggtaaaacctatactgtattgcgcttattactggcgctacaggcttgcgatgaaaac
ttaaaaattgtgctggcggcgcctacaggtaaagcgcaacagcgtatgaccgaatctatc
atgaacagcatagacgggcttcgcggcaagttggacgacacagtgcttaacaacgtgcct
accgatgctgtgacgctacatagattactaggattgcgcgagcacggtgtatcgactaag
ttcaatcagcacaaccagttgtcagcagatgtactcattgtcgatgaggcaagtatggtc
gacttagcgctaatgacacgtatagtacgagcattgccagaccatgcacggctctatttc
attggagacgctgaccagcttcctgcggttgagctcggtaacgtgctagagcagctagtt
agtaccgagacggcaagttttgacgacaacgcgaatgtgccaaatggcacgaacagcgca
catagctcacttagtttaaacaatcatgacgacgggctttctttaggtggcgtgccatct
ttgatgcgtcagcacattgctacgctatgcccgcatttgcccctgttacctgttgatgag
cacgcaaaaagctatgtagcaactctgcaagcaccgcagcgcttcaaggggcaggtggct
aaagttgcaacggccatacagcgaggtgatgcaagcggtgcacttgccgctattaccgat
aagactggcgacaataacgaaagtgcgggtcttggttcaaatattgattcaaaccctggt
tcaaatacggcatcgcgcctacaatctggcgttcacttatggccagagtaccaagtaagt
ggccgtgatttacaccagttggccaaagaaagcttcttgcctatttttgatgctggcagt
gccgaagaagcgcttaatcgcctgaatgtggttaggtggctaaccccagttcgcaaagga
gcaatgggtgtagaagggctgaataatttggtgttcgatgccatcaagcacaagatcaga
aagcgggaaggccatttctatcaaggtcagcccattatgattgtaaagaatcatcatcct
caacgactatcaaacggtgaggttggtgtaatctggcctgacagcaaaggaaagctatat
gcgtggttttaccaggatagccaagcttcaggtcaaaacggttcaagtcagaaagcttcg
gcaaatgcgggagacagtgctgacaagacgctagaacaaaaacaagcgttgcgcagcata
tcgctatcaagagtaccgcagtttgaaactgtgtatgccatgaccatacataaatctcag
ggctctgagtttaatcatgttgtacttattcttcctaagcctgatagcgagaaagccgcc
aatttatttcatcgaggcctagtgtacacagggttaacccgtgctaaagacggctgctta
atcatctctgacaacgctacatttagccacatggttcaacgggtggataagcgttattcc
gggctgtctgaagcgattagcctgcacctagagagcacatcaaacgccaccccagaggtt
gaatag
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