Alteromonas macleodii Balearic Sea AD45: AMBAS45_11600
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Entry
AMBAS45_11600 CDS
T02253
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
amb
Alteromonas macleodii Balearic Sea AD45
Pathway
amb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMBAS45_11600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amb03019
]
AMBAS45_11600
Messenger RNA biogenesis [BR:
amb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AMBAS45_11600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AFT95785
LinkDB
All DBs
Position
complement(2709777..2711165)
Genome browser
AA seq
462 aa
AA seq
DB search
MLHPSADDLWFLPLGGTGEIGMNLNLYGHDGQWLMVDCGVSFDEPLVPAYKGVSQASNQN
TFKATTHRVVAPNPSFIAKQKEALAGIVITHAHEDHVGAIPYLWERFQKPIYTTSFTAEV
LRRKLARSKLANRIAIIEVDAGDTKQIGPFSVNWLAITHSLPEPFALKINTPVGTVLHTA
DWKIDANPITGLPFDVSLYKRLGSENILAMVGDSTNATKPGFSISERSCYDGLLSTIAPL
KGRAVVGCFGSNIARLISLAKVAKKTKRYMALYGRSLMNMYGIAKQQGIWPDDLPVTDPQ
HLGYLPPHEVLAVATGSQGEKNTALARFAKDTHPHLSLDKGDTVLFSSIVIPGNEESVGR
LSKALQAKGVTVIHSEDSTLPIHASGHPCEEELKLMYHWVKPTIAIPVHGEHQHLQAHAN
IAKACGIKKTYVGQNGDLYRLAPQPSIRRQVVPVGRIPVQQE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgttgcacccatctgctgatgatttgtggtttcttccgttaggcggaacgggcgaaatt
gggatgaacctcaatttgtatggtcacgatggtcaatggttaatggttgactgtggggtt
tcttttgatgagcctctcgtacctgcctacaaaggcgtcagccaagcgtctaaccagaat
acgttcaaagccactacgcatcgcgttgtggctccgaacccttcatttattgctaaacaa
aaagaagcactggctggcattgtcattacccacgcccatgaagatcatgtaggcgcaatt
ccttacctttgggaacgtttccaaaagccaatttatactacgtcttttaccgccgaagtg
ttaaggcgaaagcttgcaaggagcaaattggctaaccgtatcgccattattgaagtcgat
gcaggcgataccaagcaaattgggccttttagcgttaactggctagccattactcattcg
cttccagaacctttcgcactaaaaatcaatacaccagtaggcacagtattgcatacagca
gactggaaaattgatgccaaccccataacaggtttaccttttgacgttagcctttacaag
cgactaggcagtgagaatattcttgccatggttggagactctaccaatgcaacaaaaccg
ggcttttcaatttcagagagaagttgttacgacggcctattaagcactatcgcgccgtta
aaggggagagcggtggtaggatgctttggtagcaatatagcacggctaatttcgctggct
aaagtcgcgaagaaaactaagcgctacatggcgctgtacggtcgttcgttaatgaacatg
tacggcattgccaagcaacagggcatttggccagacgatttacctgtgaccgatccccaa
catttaggttatcttcccccccatgaagttttagccgtagcgacaggcagccagggcgag
aaaaataccgcgctggcgcgttttgcaaaagacactcaccctcaccttagtttagacaaa
ggggatactgtgctattttcttcgatagttattcctggaaatgaagaaagtgtaggccga
ctaagtaaagcgctgcaggcaaagggagtaacggttattcacagtgaagatagcacgctg
ccaattcatgccagcggtcacccctgtgaagaagaattaaagctcatgtatcattgggta
aaacctaccattgctattccggttcacggcgagcatcaacaccttcaagcacatgcaaat
attgcgaaagcgtgcggtattaaaaagacctatgtagggcagaacggtgatttgtacagg
ctagcgccacagccaagcattcgcagacaggttgttccagttggtcgcattcctgtacag
caagagtaa
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