Alteromonas macleodii Balearic Sea AD45: AMBAS45_12770
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Entry
AMBAS45_12770 CDS
T02253
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
amb
Alteromonas macleodii Balearic Sea AD45
Pathway
amb03030
DNA replication
amb03430
Mismatch repair
amb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMBAS45_12770
03430 Mismatch repair
AMBAS45_12770
03440 Homologous recombination
AMBAS45_12770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amb03032
]
AMBAS45_12770
03400 DNA repair and recombination proteins [BR:
amb03400
]
AMBAS45_12770
Enzymes [BR:
amb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMBAS45_12770
DNA replication proteins [BR:
amb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMBAS45_12770
DNA repair and recombination proteins [BR:
amb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMBAS45_12770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_14
AAA_22
RuvB_N
AAA_2
AAA_5
AAA_18
Rad17
AAA_16
ResIII
AAA_19
AAA_7
nSTAND3
AAA_assoc_2
ABC_tran
AAA_24
PIF1
Motif
Other DBs
NCBI-ProteinID:
AFT96019
LinkDB
All DBs
Position
complement(2979447..2982503)
Genome browser
AA seq
1018 aa
AA seq
DB search
MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEEGQGANPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKAMSR
EQIVGQLQHILEHEQLPFEPQALALLARAAQGSMRDALSLTDQAIAQGGNQVLASVVTDM
LGLMDKNQLLKVVHAVVSKSPADVLQLVNDIAEQAPDYDNVHSELASLLHQIALTQWVPE
ACKLETTSAKAIFQLAKTIPAEQVQLLYQIALQGRKDLPFAADGKSAFEMTLMRMMSFAP
NTPIDDTVSEIENGRSEHSLPVDHASSSGGPGNVGKQEEAPLSETSATNVQEETPSHLSV
ESTSEQSLGSAPSTQDSLATSIIEKEQQEQSTSPFESQQEQENAAADESDTLSALPHAES
GATSTQTTALERDASHDDESVKPAPTSSIEELAVENTAVQAVQTESVPAELEPTPSKVSA
SHNEAAQYFDEPPLDAYMDDMPLSSEDDGSLGFDGVQSAEGFHNAEGSYDAEGSHNAKGS
DKNSESLAHENEASSLTAEEQLTSTADMLALRQKLKQRKAQDAEAKSTSAANAMTESASD
IQARFTRSKAEALSAAQTAHGINKGGDNSSGQPSADNEIKSGDLNPVGHENSPELLNSSP
KPLNNSPERIDSGSEHKDNSVARGDTPQLESTNSGSSLGNTHAYSSDAMHTSESEKNHSS
SNHTSDFSLDEFEEDMPFSNDESEAQSNSETPVEDMPPWATDYDNQPPQHVEGADYVEAP
SDSSSNYDSAPEQMESAGDRSFARDALNFDTPLSSTYNGQLKAYLNDGSKLTHASQIDEW
SNLVEQMPVAGLLKQLVLHASFSRAGNQVSLEIDHSQTHLLNDSAKKQLVDAIHHGLGEN
VEVNITLGEPASTPFALQQEIHAMRHAHAHSVIKTDDTIQALLSTFDASVLTDSVKAR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtactagcaaggaagtggcgaccgggcaagttcagtgaacttgtgggt
caggaacatgttgtctctgccatttcaaatgctttggataacgatcgtctacaccacgct
tatctgtttactggtacgcgaggcgtaggtaaaactaccattgcacgtattttttcgaaa
agccttaactgcgaagaaggacaaggggcaaacccttgcggtcaatgtaacacctgtaaa
gagatagagcaggggaactacgttgatttgttagagattgacgctgcatcaagaaccaaa
gttgaggatactcgcgagcttcttgataacgtgcaatacaaacccactcgcgggcgttac
aaagtgtaccttatcgatgaggtacacatgctttcaaaacacagctttaatgcgctgtta
aaaacgctggaagagccacctccacacgttaagttcttactggcgaccaccgatcctcaa
aagcttccgataaccatcttatcccgttgcttgcagtttaacttgaaagccatgtctcgg
gagcagattgttggacagctgcagcatattttagagcatgaacagctgccttttgagcca
caagcgctagcgcttttggcaagagccgcccaaggcagtatgcgtgatgcgctgagttta
acagaccaagcgattgcacagggtggaaaccaagtgctggcatcggtggtaaccgatatg
ctggggctgatggacaagaaccagttgcttaaagtggttcatgcggtagtaagtaaaagt
cctgctgatgtattgcagttagttaatgacatcgcagagcaagcccccgattatgacaac
gtacacagcgaattggctagcctgctgcaccaaatagcgttaacgcaatgggtgcctgaa
gcatgtaagctagaaaccacatcggctaaagcgatatttcaattagcgaaaactattcca
gctgagcaagtgcagctgctatatcagattgcactgcaaggaagaaaagacttaccgttt
gctgcggatggaaaaagtgcgtttgaaatgacattgatgcgaatgatgtcgtttgctcca
aacacccccatcgacgacaccgtaagtgaaattgaaaacgggaggagtgagcatagttta
cctgtagatcatgcttcttccagtggtggcccgggaaacgtcggtaagcaggaggaagcg
ccgttaagcgaaacttctgcaaccaatgtgcaggaggagacgccttcacatctatcggtt
gaatctacctctgaacagtcgttaggaagtgcgccatctacccaagactcacttgctaca
tcaataatcgaaaaagagcagcaagaacaatcgacgtctccatttgaatcacagcaagag
caggaaaatgcggccgctgatgaaagcgatactctgtcggcgctacctcatgcagagtca
ggtgcaacgtcgactcaaacaacagcactcgagcgtgatgcttcacatgatgatgaatct
gtaaagccagctccaacttcatctattgaagaactagccgtagaaaacaccgcggtacaa
gcggtacaaacagaaagcgttcctgcagagcttgaaccaacgccaagtaaagtcagtgcg
tcccataacgaagctgcgcaatatttcgatgagcctccgttagatgcgtacatggacgat
atgccactttcgtcagaagatgatggctctttaggttttgacggtgttcaaagcgctgaa
ggttttcataacgctgagggctcttatgacgctgaaggctctcataacgctaaaggctct
gataaaaacagcgagtcgttggcgcacgagaacgaagcgtcttcattaaccgcagaagag
cagcttacttctacggctgatatgttggcacttcgtcaaaagttgaagcaaagaaaagca
caagacgcagaggcaaaaagtaccagcgcagcaaatgctatgaccgaaagtgcaagcgat
attcaagcgcgttttaccagaagcaaagccgaggctttgagtgctgcacaaactgcacat
ggaattaataagggtggcgataatagttcagggcagcctagtgctgataatgaaatcaag
agtggtgatttaaaccccgttgggcatgaaaacagccctgagctgctaaatagtagtcct
aagcctctaaataatagcccagagcgtatagatagcggctcagaacataaagacaatagt
gttgcgcgcggtgacactcctcaactggaaagtacaaattcaggctcgtctttaggtaat
actcacgcgtattcttctgacgctatgcatactagcgagtcagaaaagaatcattctagc
tcaaaccacacgagcgatttctcgcttgatgagtttgaagaggatatgcctttttcaaat
gacgaatctgaggcgcaatcaaactcggaaacaccggttgaggatatgccaccttgggct
actgattacgataatcaaccacctcaacacgttgaaggtgctgattatgttgaagcgccc
tcagatagcagctccaattacgacagtgcccctgagcagatggaaagtgcgggagatcgg
tcttttgcgcgggatgctctaaattttgatacgccgctgagcagtacctataacgggcag
ttaaaagcgtacttaaatgacggaagcaaattaactcacgctagccaaattgacgaatgg
agcaatctagttgagcaaatgccagttgctggtctactcaaacaattggtgctgcacgca
tcattttctcgagcgggcaatcaggtgtcccttgaaattgaccatagtcagacgcattta
ttaaatgatagtgcgaaaaagcaattggttgatgcaatccatcatgggttgggtgaaaac
gttgaagtaaatatcacgttaggtgaaccagcatctacaccttttgcgttacaacaagag
attcatgccatgcgccatgcgcatgcacactcggtgattaaaaccgacgatacaattcaa
gcattgctatcgactttcgatgcgtcagtgctaaccgattcggttaaagcgcgatag
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