Alteromonas macleodii Balearic Sea AD45: AMBAS45_18970
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Entry
AMBAS45_18970 CDS
T02253
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
amb
Alteromonas macleodii Balearic Sea AD45
Pathway
amb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMBAS45_18970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amb03019
]
AMBAS45_18970
03110 Chaperones and folding catalysts [BR:
amb03110
]
AMBAS45_18970
03029 Mitochondrial biogenesis [BR:
amb03029
]
AMBAS45_18970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amb04147
]
AMBAS45_18970
Enzymes [BR:
amb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AMBAS45_18970
Messenger RNA biogenesis [BR:
amb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AMBAS45_18970
Chaperones and folding catalysts [BR:
amb03110
]
Heat shock proteins
HSP60 / Chaperonin
AMBAS45_18970
Mitochondrial biogenesis [BR:
amb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AMBAS45_18970
Exosome [BR:
amb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AMBAS45_18970
Exosomal proteins of other body fluids (saliva and urine)
AMBAS45_18970
Exosomal proteins of breast cancer cells
AMBAS45_18970
Exosomal proteins of colorectal cancer cells
AMBAS45_18970
Exosomal proteins of bladder cancer cells
AMBAS45_18970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFT97249
LinkDB
All DBs
Position
complement(4459010..4460647)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVRFGDDARSKMLKGVNTLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVTEGLKSVAAGMNPMDLKRGI
DKAVAAAVEELKALSTDCADSKSIAQVGTISANSDAEVGDIIAQAMEKVGKEGVITVEEG
QALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDNPFILLVDKKISNIRELLPTLEGV
AKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLDLEKVQLEDLGTAKRVVINKDNTTVVDGNGDQEAIEGRCAQIKGQIEDSTSDY
DKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALV
RAAAKLADLTGDNDDQTVGIKLALRAMEAPLRQISINSGAEASVVVNEVKNGEGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFASSIASLMITTEAMVAELPKEDAPAMPDMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtacgttttggtgatgacgctcgcagcaaaatgctaaaaggcgta
aacacactagctaacgcagttaaagtaacactaggtccaaaaggccgtaacgttgttcta
gacaagtctttcggtgcaccaactatcactaaagatggtgtgtctgtagcgaaagaaatc
gagcttgaagacaagttcgagaacatgggcgcgcagatggtaaaagaagttgcgtctaaa
gcgaacgacgaagcaggtgacggtacaactactgctactgtacttgctcaagcaattgtt
actgaaggtcttaagagcgttgcagcgggtatgaacccaatggatcttaagcgcggtatc
gacaaagcagttgcggcagcagttgaagagcttaaagccctttctactgactgtgcagac
agcaagtctatcgctcaagtaggtactatctctgcaaactctgatgcagaagttggcgac
atcattgctcaggcaatggaaaaagtaggtaaagaaggtgttatcactgtagaagaaggt
caggcacttcaaaacgaactagacgttgtagaaggtatgcagttcgaccgcggttaccta
tctccatacttcatcaacaaccaagaaaacggtactgttgaactagacaacccgttcatc
cttttggttgacaagaagatttctaacatccgcgaactacttcctacccttgaaggcgta
gcgaaagcgggtaagccgctaatgatcatcgctgaagatgttgaaggcgaagcgcttgct
acactagtagttaacaacatgcgcggtatcgttaaagttgcagcggttaaagcaccaggt
ttcggtgaccgtcgtaaagcaatgcttcaagacatcgctatcctaactggcggtacagta
atctctgaagaaattggtctagaccttgaaaaagttcagcttgaagacctaggtactgct
aagcgcgtagttatcaacaaagacaacacaactgttgttgacggtaacggcgaccaagaa
gcgattgaaggccgttgtgctcaaatcaaaggtcaaattgaagactctacgtcagactac
gacaaagagaagctccaagagcgtctagctaagctttctggcggtgttgcagtaattaaa
gttggtgcagcaactgaagttgaaatgaaagagaagaaagaccgcgtagaagatgcacta
cacgcaactcgcgcagcggttgaagaaggtgtggtacctggtggtggtgtagcactagtt
cgcgcagcagctaaacttgctgaccttactggcgacaacgacgaccaaacagtaggtatt
aagcttgcactacgtgcaatggaagcgcctctacgtcaaatctctattaactcaggtgca
gaagcatcagtagttgttaacgaagtgaagaacggtgaaggtaactacggttacaacgca
ggtaacgacacttacggcgacatgctagagatgggtatccttgacccaactaaagtaacg
cgctctgcactacagttcgcctcttcaattgcttcactaatgatcacaactgaagcaatg
gtagctgaactacctaaagaagacgcaccagcaatgcctgatatgggcggcatgggtgga
atgggcggcatgatgtaa
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