Alteromonas mediterranea DE: MADE_000001021170
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Entry
MADE_000001021170 CDS
T00747
Symbol
ruvC
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MADE_000001021170 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amc03400
]
MADE_000001021170 (ruvC)
Enzymes [BR:
amc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
MADE_000001021170 (ruvC)
DNA repair and recombination proteins [BR:
amc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MADE_000001021170 (ruvC)
RecFOR pathway proteins
MADE_000001021170 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AGV53670
UniProt:
T2DL27
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All DBs
Position
1449530..1450048
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AA seq
172 aa
AA seq
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MVILGIDPGSRITGYGLIARKQGKLVYVASGCIRVGTADLPSRLANIFTGVGDIIRQYKP
DQFAIEQVFMAKNPDSALKLGQARGAAIVAATQAQLPVAEYSARQIKQSVVGKGGADKTQ
VQHMVKHLLNLSGTPQADAADALAVALCHAHTEQSLINMAGQARKTVRGRLR
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggttatactgggtatagatccaggttctcggattacaggctacggtttaattgcgcgt
aagcaaggtaaactcgtgtatgtggctagcggttgtattcgcgttggtacggcagatttg
ccttctcgccttgcaaatatttttaccggtgttggcgatattattcgtcaatataaaccc
gaccagtttgctattgagcaagtatttatggcgaaaaaccctgattcagcgctaaagctt
ggtcaggccagaggggccgccattgtggcagccacgcaagcgcaacttcctgttgctgaa
tacagcgcaaggcaaataaagcagtcggtagttggaaaaggtggcgcagataaaacacaa
gttcagcatatggtaaagcacctgttgaatttaagtggcaccccacaagccgatgccgca
gatgccttggccgttgccttgtgtcatgcacataccgaacagagcctgataaacatggca
gggcaagcccgaaaaaccgttcgcggccgcttgcgttaa
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