Alteromonas mediterranea DE: MADE_000001021815
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Entry
MADE_000001021815 CDS
T00747
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc00550
Peptidoglycan biosynthesis
amc01100
Metabolic pathways
amc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MADE_000001021815
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MADE_000001021815
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amc01011
]
MADE_000001021815
Enzymes [BR:
amc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MADE_000001021815
Peptidoglycan biosynthesis and degradation proteins [BR:
amc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MADE_000001021815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AGV53753
UniProt:
T2DM02
LinkDB
All DBs
Position
complement(2050240..2052153)
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AA seq
637 aa
AA seq
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MHRKRQAIRDHSAEANLFARRATIAFIIVIAMLGIVLNNLYSLQVTQFEDYQTRSNGNRI
KVLPIAPNRGLIYDRNGVLLAENRPVFSLEVIPEQVDDIDATLLELTELMGITNDELERF
QSTLKGTRRFKPVALRTQLSEEEVALFSASKHKFPGVQIEARLARHYPYKETLTHALGYV
ARINKRDLQKLVEAGQEDNYAATHDIGKLGIEKYHEELLHGKVGYQQVEVNNQGRIIRVL
SVEPPTPGKDIVLNLDLKLQLEAQRIIDGMRGAIVVTDVKTGGVLALYSNPSYDPNLFVH
GISSKNYSALLNSPDRPLINRATQGQYPPASTIKPHLGLVGLEEGVITKDYTITDTGRYK
LPNVSHVWRDWRRWGHGKVDVSKAIEVSCDTYYYELAYKLGIDKISDAMYKFGFGDFTGI
DLYEESDANMPSRGWKRARFNQPWYIGDTIPVGIGQSYWTTTPVQLNTSVNTLINAGERY
IPQIIRGYMKTDSSVDLIPLKSLRPIEIKNRDNLDVVLNAMRDVVSGEEGGARHAFADTP
YDSAGKTGTAQLFTVGQNEKYDASKIDERLRDNAMYVGFAPFDDPEISVTVVLENVGGGS
KNAAPVARQIMDFYFKDRVFDTVNTAQSNNTNKLGAN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgaaaacgtcaagcgatacgcgaccattcagccgaagcgaacttgttcgctcgt
cgggcgacgattgcttttatcattgttatagccatgttgggcattgtgctaaacaacctt
tattctttgcaggttactcagtttgaagattatcagacccgttctaacggtaaccgaatt
aaagtgctgccgatagcgcccaaccgcgggcttatctacgatcgtaacggtgtgctttta
gcagaaaatcgccccgtttttagtttggaagtcattccggaacaggtcgatgatattgat
gccacccttctggaactgactgaactgatgggtattactaacgatgaacttgaacgcttt
cagtcaacgcttaaaggtacccgccgatttaaaccggtagcacttcgtacacagcttagc
gaagaggaagttgcgctattttccgccagcaaacataagtttcccggcgtacaaattgag
gctcgtctggcccgtcattacccctacaaagaaacccttacgcatgcccttggttacgtt
gcccgaattaataaacgagacttacaaaagcttgttgaggcgggccaagaagataactat
gcggctacgcatgacattggtaagttgggtattgaaaaatatcatgaagaactcctgcac
ggaaaggttggttaccaacaggtggaggtcaacaatcaaggccgaattattcgcgttctt
agtgttgaaccgccaacgccaggcaaagacatcgtacttaatttagatctaaaacttcag
ctagaagcccagcgcattatcgatggcatgcgtggagcaattgttgttaccgacgtgaaa
accggtggagtgctggcactttattcaaaccccagttacgaccccaacttgtttgttcac
ggcattagcagtaagaactattcagcactgttaaattctcccgaccgcccgcttattaat
cgagcgacccaggggcaatacccgccagcgtcgacgattaagccccacctaggcttagta
ggcttagaagaaggtgtgatcacgaaagactacaccattactgatacgggccgttataaa
ctgccaaacgtatcacacgtgtggcgtgattggcgtcgctggggtcatggcaaagttgat
gtttctaaagcgatagaggtgtcctgcgatacctattattacgagttagcctataaactg
ggtatcgataaaataagcgacgccatgtataaatttgggttcggtgattttaccggcatc
gacttatatgaagaatctgatgccaatatgcctagccgtggctggaagcgcgctcgattt
aatcagccttggtatataggcgataccattccggtaggcattggtcaaagctattggacc
accactcctgtgcagctcaatacctcagtgaatacgctgataaacgcgggggaacgctac
attccgcaaattattcgcggctatatgaaaacggatagctcggtagacctcattcccctt
aaatcgttacgtcctatcgaaattaaaaatcgcgacaacttagatgttgtattgaacgcg
atgcgcgatgttgttagcggtgaagaaggcggcgctaggcatgcctttgccgatactcct
tacgattcagcgggtaaaacaggaacggctcagctgtttactgtaggacaaaatgaaaag
tatgatgccagcaaaatagatgagcgccttcgcgataacgccatgtatgttggctttgca
cctttcgatgacccggaaatttcggtaacagtagtgctagagaacgtgggaggcggaagt
aaaaatgctgcgcccgtagcccgtcaaattatggacttttacttcaaagatcgggtgttc
gacaccgtcaatacagcacaatcaaacaataccaataagttaggggcgaattag
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