Alteromonas mediterranea DE: MADE_000001023235
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Entry
MADE_000001023235 CDS
T00747
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amc03000
]
MADE_000001023235
Transcription factors [BR:
amc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MADE_000001023235
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGV53909
UniProt:
T2DLZ3
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Position
3885013..3885903
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AA seq
296 aa
AA seq
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MHHLNYHHLYYFYLVAREGSIAKAAKLLHVTPQTVSGQLSTFENQLGYALFDRINKRLYL
NARGKVTYQYASEIFHKGNQLAEILNNSDEVNTKEFVIGITNGIPKVLFYDFVHDIMRRF
SHVKYVIKEDSFDGLLKELAINAIDFIVADRGIAPGTQISANSFFLGESSLSFFAKSPLS
EEQTFPDCLNQMPLLIQGNTSGIRQALTSWLETEQLYPKIVAEFDDTALLKLFGSEDFGV
FCAPSAISKHVEEQYGVHCIGNANTLNERYYAITGKSRADYTISEAIVESAREILA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacctaaactaccatcatttatactatttttatctggtcgcccgcgagggcagt
attgctaaggcagccaagttacttcacgttactcctcaaacggttagcgggcaacttagt
accttcgaaaaccagcttggctatgccctattcgacagaataaacaagcggctatacctc
aacgcgagaggtaaagttacctatcagtatgccagtgaaatatttcataaaggtaatcaa
ctggctgaaatacttaacaatagcgatgaagtgaatacgaaagaattcgtaataggtatt
acaaacggtattccaaaagtgcttttttacgattttgttcacgacatcatgcgtcggttt
tctcatgtgaagtatgtaattaaagaagacagcttcgatggattactgaaagagctggcc
attaacgctatcgactttattgttgcagaccgcggcatagcgccgggtacgcaaattagc
gccaatagctttttcttaggtgaaagctcgttaagtttttttgcgaaatcaccacttagt
gaagaacaaacctttcctgactgtttaaatcagatgccgttacttatccaaggcaacacg
tcggggatacgacaagcattaactagctggcttgaaaccgaacagctttacccaaaaatt
gtggccgagttcgatgataccgctttattgaagctatttggcagcgaagactttggcgtg
ttctgcgcaccatcggctatttcgaaacacgttgaagagcaatatggtgtgcattgtatt
ggcaacgcgaatacgctcaacgaacgatactacgctattacaggtaaaagccgtgctgac
tatacgattagtgaggcgattgttgaatcggccagggagattctagcgtga
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