Alteromonas mediterranea DE: MADE_000001023560
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Entry
MADE_000001023560 CDS
T00747
Name
(GenBank) DNA mismatch repair protein
KO
K03572
DNA mismatch repair protein MutL
Organism
amc
Alteromonas mediterranea DE
Pathway
amc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MADE_000001023560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amc03400
]
MADE_000001023560
DNA repair and recombination proteins [BR:
amc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
MADE_000001023560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
MutL_C
Motif
Other DBs
NCBI-ProteinID:
AGV54134
UniProt:
T2DMM8
LinkDB
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Position
complement(4118911..4120737)
Genome browser
AA seq
608 aa
AA seq
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MPIQLLSPQLANQIAAGEVVERPASVVKELLENSLDAGATKIEIDIEKGGHKRIRIKDNG
SGIEKNELQLALSRHATSKITTLDDLEQILSLGFRGEALASISSVSRLTLTSRTQAQTEA
WQAYCEGREMAVNIQPAAHPVGTTIDVADLFYNTPARRKFLRTEKTEFQHIEEVIKRIAL
SYPSVSFVLKHNDKVAKRFIADKEGSLTTRIGAVVGQKFIQNAVHIHAAYEGLQIDAWLG
NEAMLRSSNDCQFSFVNGRGMRDKLIMHAIRQAYESVWAVIEQPSFVVYLTVDPKDVDVN
VHPAKHEVRFQQGRLVHDFICKTVSDALHAMTDEASLTGMDNKRHLESDFMSHEVEHDYI
RPLQTQAESSTRAFNEQSAYPSSYSPSGKTASSGVGSSGVRAGGITQRQSRGPSAAYQSS
YNALMTPNSDNLTRDGNESSILECVNLSSLCRIYPKEEKIYLISATKVVNIWLSELFLKA
QHSQPLLMPVAVSLDNVEEKLVSMLNEAHFEINKVAGKYRLQQVPAGTRHLPWIKWFESL
LNVKFGDTINSLESALKLLSLPEALIDDEVTKALWYWLDQQSAVKQWEIIEQFAKVRPLN
LVLDVWGE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
ttgcctatacagcttttatctccacaattagccaaccaaatagccgcaggtgaagtagta
gaacgccccgcatctgtggttaaagagctgttggaaaatagcctagacgctggcgcaaca
aagatagaaatagacattgagaaaggtggccacaagcgaattcgtattaaagataacggc
tctggaatcgagaaaaatgaactacagctggcgctaagccgccacgcaaccagcaaaatt
acgacgctagatgatttggagcaaattttatctttgggttttcgtggagaagcccttgct
agtattagttcggtaagccggctaacgcttacatcgcgtacgcaagcacaaacagaagcg
tggcaagcgtattgcgaaggccgtgagatggcagtaaatatacagcccgccgcacacccc
gtgggaacaacgattgatgtggcggaccttttttataatacacctgctagacgcaagttt
ttgcgcactgaaaaaaccgaatttcagcacatcgaagaggtaattaaacgtatcgcgtta
agttaccctagcgtatcttttgtgttgaaacataacgacaaagtggcgaaacggtttatc
gctgataaagaagggagtctaaccacgcgaatcggtgctgtggttgggcaaaagttcatt
caaaacgcggtgcacattcatgctgcttacgaaggtcttcaaattgatgcgtggttaggt
aatgaagcgatgttgcgcagcagcaatgactgccagtttagttttgttaatgggcgcggt
atgcgggataaactgatcatgcacgctatacgtcaagcatacgagagcgtatgggccgtt
atagagcagccaagctttgtagtctacttaaccgttgaccctaaagatgtcgatgtgaac
gttcatcccgcaaaacacgaagttagattccagcaagggcggttagtacatgacttcatt
tgtaaaaccgtcagtgatgcgcttcatgcgatgacagatgaagcgtccctgacaggtatg
gataataagcgtcacttagaaagtgactttatgtcccatgaagttgaacacgactacatc
agaccgcttcaaactcaagctgaaagtagtactcgtgcgtttaatgagcaaagcgcgtac
ccgtcatcgtattcaccgtcaggcaaaaccgcaagtagcggggttgggagttcaggcgta
agagcagggggaataactcagcgacaaagtaggggcccaagcgctgcatatcagtctagc
tataatgctttgatgacgccaaatagcgacaatttgacccgtgacgggaatgagtcatca
atacttgagtgtgtaaatctctcctcactgtgtagaatttacccaaaagaagaaaaaatt
taccttattagtgcgacgaaagttgtaaatatctggttaagcgaactatttttaaaagca
cagcacagtcaacctttgttaatgccagtggctgtttccctcgataatgtggaagaaaaa
ctggtttcgatgctaaatgaagcgcattttgaaataaataaggttgcgggaaaatatcgg
ttacagcaggttccggcaggaactcgacatcttccgtggattaaatggtttgaatctctt
ctaaatgtgaagttcggtgacaccattaatagtcttgaaagcgcgctaaaattattgtct
ttacctgaagctttgatagacgatgaagtaacaaaagcgctgtggtactggttggatcag
caaagcgcagttaaacaatgggaaattatagagcaatttgctaaagtgcgccccttgaat
ttagtgctcgatgtgtggggagaataa
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