Alteromonas mediterranea DE: MADE_1000020
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Entry
MADE_1000020 CDS
T00747
Name
(GenBank) DNA replication protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
amc
Alteromonas mediterranea DE
Pathway
amc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MADE_1000020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amc03400
]
MADE_1000020
DNA repair and recombination proteins [BR:
amc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MADE_1000020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
AAA_29
AAA_16
ABC_tran
DUF2813
nSTAND1
cobW
NTPase_1
RsgA_GTPase
Adeno_IVa2
Dynamin_N
FtsK_SpoIIIE
AAA_28
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AEA96153
UniProt:
F2G1Q6
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All DBs
Position
2835..3959
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AA seq
374 aa
AA seq
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MPIASFYIQRDIMKLDKVQITQFRNLTSVSFSPSPSLTVIVGANGSGKSSLIEALYYLGF
GRSFRTNKHSAVIQNEKDNFSVFASCKDELGEALKLGFQRNRNDSFTCSINGEHSNKLSD
LVSLVPLQLFTPQSTDLIIGSPSERRRFCDWGLFHVEHDFQTLANQYTKFLKHRNALLKQ
QASLTAPQNTYWEEKFAELGESLTSIRVSYIDKLTPLFKVYAEEFLPNFNVELSYYKGWE
KDVSLSESLVKKREYDGKIGHTSSGPHKADLRLKVNGVNAQELLSRGQLRMAVAALQMSQ
TKLFNSATQRKSIFLLDDVGAELDADKREQFIDGLLKMDTQVFVTAIESSQLAFIQKYNE
KKMFHVEHGSVKEE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgcctatcgcctctttttatattcagcgtgatatcatgaaactggacaaagtccagatt
acccagttccgtaatctaacttccgtatcgttttctccttcgccgtcattaactgttatt
gttggcgcgaatggaagtggcaagtcttcgctcatcgaagccctctattatttgggtttt
ggtcgctcgttcagaacaaataaacacagcgctgttatccaaaatgaaaaagacaatttt
agtgttttcgcttcctgtaaagatgagttaggtgaagcgttaaagcttggctttcagcgt
aatagaaatgattcattcacttgcagcataaatggtgagcactccaataagctttctgat
ttggtcagtcttgttcctcttcaactttttacgcctcaaagtaccgatctcattattggc
tctccatcagaacgaagacgattttgtgattggggattgtttcacgtggaacatgatttc
caaactcttgcgaaccaatacactaaatttctaaaacaccgcaacgcgctattgaaacaa
caggcgagtcttacagcacctcaaaatacgtattgggaagaaaagttcgcagagttggga
gaatcgttaacctccatacgagttagttacatagataaacttaccccattatttaaagtt
tacgccgaagaatttcttccgaactttaatgttgaattaagttactataaggggtgggaa
aaagatgtttctttatcagaaagcctagttaaaaaacgtgagtatgatggtaaaatagga
catacctcttctgggccccataaagctgatctaaggcttaaagtgaatggggtgaatgcc
caggagcttttatcgagagggcagcttagaatggcagtagctgcgcttcaaatgtcacaa
accaagctatttaactctgcaacgcagcgtaaaagcatatttctacttgatgacgttggc
gctgaactagatgccgataaaagagaacaatttattgatgggttgcttaagatggatacg
caggttttcgttactgcaatagaatcctcgcaactcgcttttatacaaaaatacaacgaa
aagaaaatgtttcacgtggaacatggaagcgtgaaagaggagtaa
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