Alteromonas mediterranea DE: MADE_1000075
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Entry
MADE_1000075 CDS
T00747
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc03030
DNA replication
amc03410
Base excision repair
amc03420
Nucleotide excision repair
amc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MADE_1000075
03410 Base excision repair
MADE_1000075
03420 Nucleotide excision repair
MADE_1000075
03440 Homologous recombination
MADE_1000075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amc03032
]
MADE_1000075
03400 DNA repair and recombination proteins [BR:
amc03400
]
MADE_1000075
Enzymes [BR:
amc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MADE_1000075
DNA replication proteins [BR:
amc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MADE_1000075
DNA repair and recombination proteins [BR:
amc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MADE_1000075
NER (nucleotide excision repair)
GGR (global genome repair) factors
MADE_1000075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEA96164
UniProt:
F2G1R7
LinkDB
All DBs
Position
complement(14884..17676)
Genome browser
AA seq
930 aa
AA seq
DB search
MPDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIKQYNPTHMAV
IFDAKGKTFRDDIYKEYKANRPPMPEELRSQIEPLHTIIKAMGLPVIVESGVEADDVIGT
LAKHATEKGIDTLISTGDKDMAQLVNKHVTLINTMTNQLMDVEGVNTKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDEIYKNLDKIADLSFRGSKSMAAKMEEYE
EQARLSYTLATISIDLELDYDVETLMPCQADNEQLRDLFAEYEFKRWHAEVSALLAGGDT
SSATESTSAESSDSTQTSESATSGDIDKSKYETVLDEETFNTWLGKLQKAQLIAFDTETT
SLNYMDAELVGVSFCIEEGEAAYVPVAHDYPDAPTQLSREFVLDALKPILESSNIIKVGQ
HIKYDKNVLANYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFEDIAGK
GAKQLTFNQIALEEAGPYAAEDADITLRLHNTIWAKLKEIPELKNLLIDVEVPLACVLSR
MEQEGVLIDSQRLSQQSQDLAARIAELEKEVHEEAGEPFNLGSTKQLQHILFEKMSLPII
KKTPKGAPSTSEDVLQELALEYPLPKKIMEYRGLTKLKNTYTDKLPKMINHRTGRVHTSY
HQAITATGRLSSTDPNLQNIPIRNEEGRRVRQAFVPRKGNKFVAADYSQIELRIMAHLSG
DKGLLDAFAHGKDIHKATASEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLAKQLNI
PRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKGA
ERAAINAPMQGTAADIIKMAMIKVDDWISKNAADDVTMMMQVHDELVFEIKEDKVDSYVK
TINTLMESAATLNVPLVVEAGVGENWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattctaaaaagccgccatttattcttgttgatggatcgtcttatctctttcgt
gcttttcacggtctaccacctttaaccaactcaaaaggtcaagacaccggcgctatttac
ggcgttgtaaatatgctcaagagcctgatcaaacaatataacccaactcacatggcggtt
atttttgacgctaaaggcaaaacctttcgcgacgatatttataaagaatataaagctaac
cgcccgccaatgccggaagagctaagaagtcagatcgagcccttacacacgattatcaaa
gcgatgggtctaccggttattgttgagtcgggtgtggaagctgatgatgttattggtaca
ttagcaaagcacgccacagaaaaagggatcgatacacttatcagtacgggcgacaaagat
atggctcaactggtgaacaagcatgtcacactaatcaataccatgactaaccagcttatg
gatgtggaaggtgtaaatactaaattcggtatccctcctgaacttgtgatcgactttctc
gcgcttaaaggcgacaaggttgataacatcccaggcgtgccaggggttggtgataaaagc
gctcaagcactattaaacggtatcggcggtattgacgagatatataagaatttagacaag
atcgccgacctttcatttagaggcagtaagtcgatggctgctaaaatggaagagtatgaa
gaacaggcccgcctttcttacaccctcgccacgattagtatcgatctggaattggactac
gatgtcgaaacgctaatgccttgccaagccgacaatgaacaacttcgcgatctatttgcc
gaatacgagtttaagcgttggcacgctgaagtgagtgctttgttagcaggcggcgataca
tctagtgctacagaatccacaagcgctgaaagcagcgactctacgcaaacgagtgaatct
gcgacatctggcgatattgataagtctaagtatgagaccgtgctagatgaagaaacattt
aatacttggcttggcaaattgcaaaaagcacagctcattgcgtttgatactgaaacgacc
agccttaattatatggatgcagagcttgttggcgtctcattttgtattgaagaaggtgag
gctgcctatgtacctgtagcgcatgattacccagatgctccgacacagttatctcgcgag
tttgtattagatgcacttaagcctattttagaatcgagcaatatcattaaagtaggtcag
catatcaaatacgataaaaacgtattggcaaactacgatattacgttgaacggtattggc
tttgacaccatgcttgagagttatgtgcttaacagcactgcacaacgtcacgacatggac
tcccttgctcttgcctatctcggccacaaaaccattcactttgaagacattgccggtaaa
ggggcgaagcaacttacgtttaaccaaattgctcttgaggaagctgggccgtatgctgct
gaagatgcggatattacgcttcgcttgcacaatacaatatgggctaagctgaaagaaatt
ccagagcttaagaacttgttaattgatgtagaagtgccccttgcttgcgtactgtcgcga
atggagcaagaaggggtattaattgatagtcaaagattgagtcagcaaagccaagatctt
gccgcccgtatcgctgagctggaaaaagaagtccatgaagaagccggcgaaccatttaac
cttggttcaacaaagcagcttcaacatattctatttgaaaagatgtcgctgcccataata
aagaaaacgcctaaaggcgcgccatcaacgtctgaagacgtgctacaggagcttgccctt
gaatacccgcttcccaagaaaattatggaataccggggattaaccaagttgaaaaatacc
tacaccgataagcttccaaagatgatcaatcatcgaacaggccgtgtccacacatcttac
catcaggccataacagcgaccggaagactctcttctaccgatccgaatttacaaaacatc
cctattcgcaacgaagaaggccgtcgtgtacgccaagcctttgttccccgtaaaggaaac
aagtttgttgctgccgattactcgcaaattgaactgcgcattatggctcatctgtcaggg
gataaaggtctgttagatgcgtttgcacatggcaaagatatacataaagccaccgcatca
gaggtatttggggtgccgcttgacgaagtaacaaccgaacagcgacgtagcgctaaggcc
attaactttggccttatttacggcatgagtgcatttgggttggctaagcaattaaatatt
ccccgtaatgaagcccagaaatacatggatctttacttcgaacgttaccctggtgtactt
gaatatatggactcaacccgcgagagtgcaaaagaaaaaggctatgttgaaacggtattt
ggccgacgtctttacctgccagatattaaagcaagcaatggtgcccgtagaaaaggcgca
gaacgcgccgctatcaatgcgcctatgcagggtacagccgcagacatcattaaaatggct
atgatcaaagtggatgactggatttcaaagaatgccgcagacgatgtcactatgatgatg
caagtgcacgatgagttagtgttcgaaataaaagaagataaagtcgatagctatgtgaag
accatcaacacgcttatggaaagcgctgcaacgcttaatgtaccgcttgttgttgaagcg
ggtgttggtgaaaactgggacgaagcgcactag
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