Alteromonas mediterranea DE: MADE_1000765
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Entry
MADE_1000765 CDS
T00747
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MADE_1000765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amc03021
]
MADE_1000765
03400 DNA repair and recombination proteins [BR:
amc03400
]
MADE_1000765
Enzymes [BR:
amc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MADE_1000765
Transcription machinery [BR:
amc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MADE_1000765
DNA repair and recombination proteins [BR:
amc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MADE_1000765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AEA96302
UniProt:
B4S2X2
LinkDB
All DBs
Position
164202..164474
Genome browser
AA seq
90 aa
AA seq
DB search
MARVTVEDAVDKIGNRFDLVLVAARRARQIATEGKDPMVDVQNDKPTVTALREIEEGLVT
AATLEQADLQAQEQQEHAEFASVANILSDQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaactgtagaagatgccgtagataaaattggtaaccgctttgacctagtg
cttgttgctgcacgccgtgcacgtcaaattgccactgaaggcaaagatcctatggttgac
gttcaaaacgacaagccaactgtgacagcacttcgtgaaattgaagaaggtttagtaacg
gctgctacgcttgaacaagcagaccttcaagcgcaagaacagcaagaacacgctgaattt
gcgtctgttgcaaatattttatctgatcagtaa
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