Alteromonas mediterranea DE: MADE_1002390
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Entry
MADE_1002390 CDS
T00747
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc00550
Peptidoglycan biosynthesis
amc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MADE_1002390
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
amc01003
]
MADE_1002390
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amc01011
]
MADE_1002390
Enzymes [BR:
amc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
MADE_1002390
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MADE_1002390
Glycosyltransferases [BR:
amc01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
MADE_1002390
Peptidoglycan biosynthesis and degradation proteins [BR:
amc01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
MADE_1002390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
UvrB_inter
CrgA
Motif
Other DBs
NCBI-ProteinID:
AEA96627
UniProt:
F2G6F7
LinkDB
All DBs
Position
496455..498815
Genome browser
AA seq
786 aa
AA seq
DB search
MTKRQTKNNSSSKSNASKKTAAGKSTTKRSWFFKLFWRVCLIGLVVLGAYAFYLDAQIKH
AFSGNKWEVPAQIFARPLEVSKGEEITPQEVIDELNLLGYRKVAFADSSGEYSYQNKVLT
VQRRAFQFPEGAEPLRHLVLTWEGARIGEIYDKSQGRPYGSVKLEPWLVTRMTSGSHEDR
MLVTLDTIPEMLPKALTLVEDRNFYNHHGVAPLSILRALMANIAAGRTVQGGSTLTQQLV
KNMFLTRERSLVRKAKEAIMAVIIDARYSKSEIIEAYLNEVFLGQNGDMAVHGFGLASYF
YFDRPANELSTPEIATLVAIIKGPSYYNPRKYAERTKERRDLVLRMLFDENEINRQDYER
YVNMPLGLASGASLASGKHPAFMEQVRKELNEILAEPSLRDSGVKVFTTLDIVAQRRAEK
ALSGTLNGLQKDRSVPLQGAMVVTDSASGEVRAIVGGKDFAFKGFNRALDAKRPIGSLIK
PAVYLTALEDPTQFNLATPLKDEPITLESRNGTEWSPQNYDKEFRGQVPLLQGLVESLNV
PTVNLGMQIGLDALADTIERLGVTTPVDKVPSLTLGAFELTPFSTNQMYQTLSNDGRYIP
LHTVSSVVTADNALLWKKAEFFAQRTDEAATYLLNYALYKVTTEGTAKRIGWNFGNVNMA
GKTGTTDDYRDSWFSGFDRNNVVTVWVGNDDNQPVNLTGAGGALPVFVNYMKSQSPKSLS
RRFPKGLGIAHFDAKTGAVVVAGCAGSLSVPAILDVLPPAQQDCAGRPVDENGDKKEKSW
WERIFG
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaaagacagactaaaaacaattcatcttcaaaaagcaatgcttcgaaaaaaact
gcagcgggaaaaagtacaaccaaacgttcgtggttttttaaactgttctggcgtgtatgc
cttatagggcttgtggtgctaggggcatatgccttttatctcgacgcacaaattaaacat
gcgttctcgggtaacaagtgggaagtacctgcgcaaattttcgcacgtcctttagaagtg
agtaaaggcgaggagataacgccacaagaagtcattgatgaactcaatttgctgggctat
cgcaaggtggcttttgctgacagtagcggtgaatatagctatcaaaacaaggtgttaact
gtgcagcgccgcgcgtttcaattccccgagggagcggagcctcttcgacacttagtatta
acgtgggaaggggcgcgtatcggtgaaatatacgataagtcacaaggccgtccctacggt
tctgtaaagttagagccatggctagtaacacgcatgacgagcggctctcatgaagaccgc
atgttagtgacgttagatactatccctgaaatgttacctaaagcgctgacgctggtggaa
gatcgcaatttttataaccaccatggtgttgcaccactttcaatattgcgggccctaatg
gcgaatattgctgctggtcgtacggttcaaggtggtagcacgctgacgcagcagctggtt
aaaaacatgtttttaacccgcgagcgctcccttgtacgcaaggctaaagaggccataatg
gcggtcattatagacgcccgctacagcaagtctgagattatcgaagcctatttaaatgag
gtgtttttagggcaaaacggcgacatggctgtacatggatttgggcttgctagctatttc
tactttgaccgtccggccaacgagctaagcacgcccgaaatagccacgctggttgctatt
atcaaaggcccatcttattacaatccacgaaagtatgcagagcgcacaaaagagcgtcga
gatttagtacttcgaatgttgttcgatgaaaatgaaataaaccgtcaagactacgagcgc
tatgtgaacatgccgttagggcttgccagcggtgcgagtttagcaagcggtaaacaccct
gctttcatggagcaggttcgcaaagaactcaatgaaattttagcagagccaagcctaaga
gactcgggcgttaaagtgtttaccacactggatatcgttgctcagcgtcgggcagaaaaa
gcattatcgggcaccctaaatggcctgcaaaaagatagaagcgttccattgcaaggtgcc
atggtagtcaccgacagtgcaagcggtgaagtacgcgctatcgtaggtggtaaagacttt
gcatttaaaggttttaatcgagcattagatgctaagaggccaataggctcattgattaaa
ccagctgtgtacttaactgccttagaagatcctacccagtttaacttggctacacccctt
aaagacgagccaattaccctagaaagtagaaacggcaccgaatggtcgccgcaaaactac
gataaagagttcagagggcaggtgcctctgcttcaggggttagtcgaatctttgaacgtg
ccaacagttaatttaggcatgcagataggcctagatgcgttagccgataccattgagcgg
ttaggggttaccacgccagtagataaagtaccgtcgttaaccttgggcgctttcgaacta
acgccatttagcacaaaccaaatgtatcaaaccctatcaaacgatggccgctacataccg
cttcacacggtgagctctgtggttacggcagataatgcattactttggaagaaggccgag
ttctttgctcagcgcacggatgaagccgccacttacttactgaactacgccctgtacaag
gtgaccacagaaggtacagcaaaacgcataggctggaactttggtaatgtaaatatggca
gggaaaacaggtacaaccgatgattatcgcgatagttggtttagcggtttcgacagaaat
aatgtggtgaccgtttgggtcggcaatgacgataatcaaccagtaaatttaaccggtgca
ggtggcgcgctgcctgtgtttgtaaattatatgaagtcacagtcaccgaagtctctatct
agacgtttccctaaagggttaggtattgcacatttcgatgcgaagacgggggcggtagtg
gtcgctgggtgcgcaggaagtttaagtgttccggctattttggatgtactgcctcctgcg
cagcaagattgtgctggtcgcccggtagacgaaaacggcgataagaaagaaaaaagctgg
tgggagcgtatatttggataa
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