Alteromonas mediterranea DE: MADE_1003840
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Entry
MADE_1003840 CDS
T00747
Name
(GenBank) recombinase RdgC
KO
K03554
recombination associated protein RdgC
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amc03400
]
MADE_1003840
DNA repair and recombination proteins [BR:
amc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MADE_1003840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
AEA96916
UniProt:
F2G9Y9
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All DBs
Position
complement(816775..817749)
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AA seq
324 aa
AA seq
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MRSATYIGTLAPYFYQENAYTMWFKNVKAYQITQPLSLDEGDLERALNEHAFRPCGSQDM
ATMGFASPFSQAGKQGTMFHVVQQRFWITLKKQEKILPSAVVNAELDEMAAKIEMETGSP
VGKKAKADLKQEIQTRLLPQAFTKNTYTHGFISLADNLVVVDASSDGKAEAFLAMVRKAI
GSLPVVPFTRRSLQSELTHWVTEATPEGVGLLEEAEFKSTDDTGSVIRCKNQPLDSEEIT
IHLDAGKLVQKVAFEYAETLAAVMCEDGAIKRIKFTDRIKEETDDVPKDQVEARLDAEFA
LMSAEICTLLNFLRGALNLNDDSL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcagtgccacttacattggtacgcttgcgccctatttttatcaagagaatgcttac
actatgtggtttaaaaatgtaaaagcctatcaaattactcaaccgctatcgctagatgag
ggcgatttagagcgtgcccttaacgagcatgctttccgcccgtgcggcagccaagatatg
gcaactatggggtttgcttccccgttttctcaggctggtaagcaaggcaccatgtttcac
gttgttcaacagcgtttttggataacgctaaagaaacaagaaaagattcttccttctgct
gtggttaatgctgaacttgatgaaatggcagccaagatagaaatggaaacaggctcgccg
gttggcaaaaaagccaaagccgaccttaagcaagaaattcaaacccgcttgctgcctcag
gcctttacaaaaaacacctacactcatggttttatctcgttagccgacaatttggtggtg
gttgatgcgtcttctgacggcaaagccgaagcctttttggccatggtaagaaaggccata
ggctcgctgcctgttgtgccgtttacgcgcagaagccttcaaagcgaacttacccattgg
gttactgaggcaacgcctgaaggcgtaggcttacttgaagaagctgaatttaaatcaact
gatgacacaggcagcgttatccgctgtaaaaaccagccgctagacagcgaagaaattact
attcacctagatgcaggtaagctggtccaaaaagtcgcatttgaatatgcagagacgcta
gcggctgttatgtgtgaagatggtgccattaaacgcattaagttcaccgaccgcattaaa
gaagaaactgacgacgtaccaaaagatcaggtagaagcgcgccttgacgcggaatttgcg
ctgatgtcagccgaaatttgtacgctgctaaacttccttcgtggtgcgcttaatcttaac
gacgatagtttgtga
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