Alteromonas mediterranea DE: MADE_1004005
Help
Entry
MADE_1004005 CDS
T00747
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amc03036
]
MADE_1004005 (xerD)
Chromosome and associated proteins [BR:
amc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
MADE_1004005 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF3435
DUF4940
Gluconate_2-dh3
Phage_int_SAM_2
Int_N
ChuX_HutX
Motif
Other DBs
NCBI-ProteinID:
AEA96949
UniProt:
F2GA22
LinkDB
All DBs
Position
863258..864184
Genome browser
AA seq
308 aa
AA seq
DB search
MAKKERELTYVPPASQAHIDGFIEMLWLEKGLSEHTQQSYRTDLSKLAVFSNNQGIKDIA
VLSTEQLQDYLAYRHDKGLSTRSTQRALSAIRAFFVYLISKQIRVDSPVSALSNPKTPKA
LPASLSEQQVEDLLNAPQTDDPIECRDRSMLEVLYATGLRVSELIGLTMDQISLQQGVVR
VVGKGNKERLVPLGEEAIEWLLTYIKTARPILATKTSDFVYLSKRGQKMTRQTFWHRIKY
YAVKAGIEQHLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLQTL
IHSHHPRG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaagagcgagagttaacctatgtgccgccagcaagtcaggcacatattgat
ggctttatcgaaatgctatggctggaaaagggtttgtcagagcacacgcaacaaagctat
cgtaccgaccttagtaagcttgctgttttcagcaacaaccaaggcataaaagacattgca
gtgctgagtactgaacagcttcaagactaccttgcttatcgtcatgataaaggcttatct
acccgcagtactcaacgcgcgctaagcgctattcgcgccttctttgtttaccttattagt
aagcagataagagtggacagcccggtctctgccttgtcgaacccgaaaacacctaaagcg
ttacctgcttcactcagtgagcagcaggtagaagatttacttaatgccccccaaaccgac
gaccccattgaatgtagagatagaagcatgcttgaagtgctatacgctactggacttcga
gtcagtgaacttatcggtttaacgatggaccagataagccttcagcaaggtgtggtacga
gtggtaggcaaaggtaataaagagcgtttagttccgttaggtgaggaagctatagaatgg
ctgcttacctatatcaaaacagcgcgacctatactcgctactaaaacctctgattttgtg
tacctcagtaagcggggtcaaaagatgacgcggcaaactttttggcatcgcattaaatat
tatgcagtaaaggcgggaatagagcagcacttgtctcctcacaccctaagacatgctttc
gccacgcatttgctcaaccacggggctgatttgcgagtggttcaaatgttgttgggacat
agcgacctatcgacaacccaaatatacacgcacgtagccactgaaaggttgcaaacgttg
attcacagtcatcacccaaggggctaa
DBGET
integrated database retrieval system
