Alteromonas mediterranea DE: MADE_1004170
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Entry
MADE_1004170 CDS
T00747
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amc03019
]
MADE_1004170
Messenger RNA biogenesis [BR:
amc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MADE_1004170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_16
AAA_18
AAA_22
FtsK_SpoIIIE
ABC_tran
AAA_28
SKI
nSTAND1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEA96982
UniProt:
B4RWG2
LinkDB
All DBs
Position
complement(896923..897768)
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AA seq
281 aa
AA seq
DB search
MKLIIISGRSGSGKSVALRALEDLGYYCVDNIPVNLLPTLTHTVVDEYDQVAVSIDVRNL
PKNPDDLVEILDYLPSSWSMTIVYIDASDDVLVKRFSETRRLHPLAKLNKSLSEAIRAES
ALLAPIAERADLYLDTDKLTIHQLAELIRERILGKKSSRLVLVFESFGFKHGIPKDADYV
FDARFLPNPHWEPDLKHLTGLDAPVEVFLGSQPVVTKFIWQIQNLITTWLPHLERNNRSY
VTVAIGCTGGQHRSVYIAQTLSKTFSEIHPDVQIRHRELNQ
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgattataatcagtggtcgttcggggtctggtaagtctgtcgcacttcgcgca
ttggaagatttagggtactactgcgttgacaacattcctgtaaacctacttcctacccta
acccacactgttgttgatgaatacgaccaagtggcggtgagcattgatgtgcgtaacttg
ccgaaaaaccctgatgatctggtagaaattttagattatcttccgtcgtcgtggtcaatg
accattgtctatatcgatgccagcgatgatgtgctggtaaaacgcttcagcgaaacccga
cgtctgcatccccttgcgaagctcaataagtctctatctgaagccataagggcagagtca
gccttgctagcccctatcgctgaacgggcagacttgtatttagatacagacaaactgact
attcaccaacttgctgagttgatacgcgagcgaatactcggtaagaaaagctcccgctta
gtgctggtgtttgaatcttttggcttcaaacacggtattccgaaagatgccgattatgtt
tttgatgcgcgctttttacctaatcctcactgggagcctgacctgaagcacctaacaggg
cttgatgcgcccgttgaggttttcttaggctctcaacccgttgttaccaagttcatctgg
caaattcagaatttaattaccacctggctacctcatttagagcgcaacaacagaagttac
gtaacagtcgctattggctgtacaggcgggcaacaccgctctgtgtatattgcccaaact
ctgtcgaaaaccttcagcgaaatacacccagatgtacaaattcgccatcgagagctaaac
cagtaa
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