| Entry |
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| Symbol |
xseA
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| Name |
(GenBank) exodeoxyribonuclease VII large subunit
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| KO |
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| Organism |
amc Alteromonas mediterranea DE
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:amc00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MADE_1005250 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:amc03400]
MADE_1005250 (xseA)
Enzymes [BR:amc01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MADE_1005250 (xseA)
DNA repair and recombination proteins [BR:amc03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MADE_1005250 (xseA)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2955329..2956681
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| AA seq |
450 aa
MFTNSPSTSRQILTVTKLNRLARTVLEGEIGLIWLSAEISNFVAAASGHWYFTLKDNKAQ
VRAAMFKGANRNVRLRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQAFEAL
KFKLNNEGLFDATNKRPLPERINRIGVITSSSGAALHDVLSVLKRRSPQTEVIVYPSMVQ
GEAAPLQLINALRKANQRSEVDVLLLTRGGGSLEDLWCFNDESLAREIAASTLPIVSAVG
HEVDFTISDFVADVRSPTPSAAAEILSQDSTALYQTINQQKQRLARAMNHCIQANKQQLT
LKKQRLDALHPQSRIQSQWQTLDRLQLRLVHAMQRDMSTAEKRVHALNYRLNQQSPAARV
ARAKDKLSYANAKLIATMTALLKNKKSELGGSVTLLQSVSPLSTLARGYSITLTDSTTVN
NVSKVNVGDEIKTRVTDGEITSTVTNIQRQ |
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| NT seq |
1353 nt +upstreamnt +downstreamnt
atgtttacaaattcgccatctacctctcgacaaattttaacagttactaagctaaatcgc
ctcgccagaaccgtactagagggcgaaattggtcttatttggctatctgcagaaatatca
aactttgtggccgccgcttcagggcattggtacttcaccctgaaagacaataaagcgcaa
gttcgcgccgccatgtttaaaggcgctaatcgcaatgtacgccttcgcccaaaagaaggc
gataaaattttagtgcgcgcttcggtaggactatatgaagcccgcggtgactatcaactt
gttgttgagcacatggaaagcgacggtgaaggtgcgcttaagcaagcgtttgaagcatta
aaattcaagcttaataatgaagggctatttgatgcaacgaataagcggccactgcctgaa
cgtataaatcgcattggagtgatcacttcatcaagcggcgcagcgcttcacgatgtctta
agcgtattgaaacgcagaagcccgcaaactgaggttattgtttacccatctatggtacag
ggtgaagccgcaccgcttcagctaattaatgcgctgcgtaaagctaaccaacgttcagag
gtcgacgtgcttctactcaccagaggcggaggctcgctggaagatttatggtgctttaac
gatgaaagcttggccagagaaatagccgccagcacccttcccatcgtgagcgccgttggc
cacgaagtagactttaccattagcgactttgtggctgatgtacgctctcccaccccatct
gctgcggcagaaattttaagtcaagactctacagcgctctatcaaaccataaaccagcag
aagcagcgtttggcccgcgcgatgaaccattgtattcaggcgaataagcaacaactgacc
cttaaaaagcagcgcttagatgctctgcacccgcaaagtcgtatacagtctcagtggcaa
accttagacaggttacagctgcgcttagtacacgcaatgcaaagggatatgtccactgcg
gaaaagcgcgttcatgcgcttaactaccgattaaatcaacaatcgcctgcggcgcgtgta
gcccgagcgaaagacaaacttagttacgcaaacgctaagttgatcgctactatgactgcc
ttgctcaaaaacaagaaaagtgaactcggtggttccgtaacactcttacaatctgtaagc
ccgctctctacgttggctcgaggctacagcattacccttactgatagcactacggttaat
aacgttagcaaggttaatgtaggcgatgagataaaaacacgagtgactgatggcgaaata
accagtacagtgacaaatattcaacggcaatag |
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