Alteromonas mediterranea DE: MADE_1005880
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Entry
MADE_1005880 CDS
T00747
Name
(GenBank) Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
amc
Alteromonas mediterranea DE
Pathway
amc02020
Two-component system
amc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MADE_1005880
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MADE_1005880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amc03000
]
MADE_1005880
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
amc02035
]
MADE_1005880
Transcription factors [BR:
amc03000
]
Prokaryotic type
Helix-turn-helix
Other families
MADE_1005880
Bacterial motility proteins [BR:
amc02035
]
Flagellar system
Flagellar assembly proteins
Others
MADE_1005880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
Mg_chelatase
AAA
Asp_Glu_race
bpMoxR
AAA_7
AAA_19
BRCT_3
Motif
Other DBs
NCBI-ProteinID:
AEA97318
UniProt:
F2G3X6
LinkDB
All DBs
Position
1183266..1184729
Genome browser
AA seq
487 aa
AA seq
DB search
MKDILLVSDNQELIQNLETIVTFMGESCQSRGFSECERYLHESGADAVLIEYRSPTAVSN
LVEKFPHIPFVALVESNTQASASCNLVSVIATPLTYPVLTQAIHRCQEYSRRKPGLSRAA
GTKTRLFRSLVGKSEQIQIVRRLVEQVAPTDATVLILGESGTGKEVVARNVHFLSERKDG
PFIPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAEGGTLFLDEIGDMPLQMQV
KLLRVLQERMFERVGGNKPLQCNVRIIAATHRNLETMISEDKFREDLYYRLNVFPIDSPA
LRQRKDDIPLLLQELNSRIQGDGVEGVRFTEQAVASLMEHEWAGNVRELSNLVERLTILY
PGQIVDIADLPEKYQYGDVQAYEPDYPEEILEREAFNALFAEAAAQEPEEDLNEQNHEGF
NGMVSSSLPEEGVNLKEYLSELEVNLIRQALDNQDWVVARAADKLGMRRTTLVEKMRKYD
IQRTEEA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatattgctggttagtgataatcaggaacttattcaaaacttggaaactatc
gttaccttcatgggagagtcgtgccagtcacgaggcttcagtgaatgcgagcgatacctc
catgaaagtggtgcagacgccgtgcttatcgagtaccgctcgcccactgcagtaagtaat
ctggtagaaaagtttccacacataccgttcgtcgctttagttgagagtaatacacaggca
tctgcaagctgtaacctggttagtgttatcgcaacaccattaacttacccagttttaacg
caggctatacatcgctgccaagagtactctagacgcaaacccggtttatctcgtgcggca
ggcacgaaaacccgattgttcagaagccttgttggcaaaagtgagcaaatccaaattgtg
cggcgcttagttgagcaagtcgcaccgaccgacgctaccgtattgattttaggtgagtct
ggtacgggtaaagaggtggttgcacgtaatgttcactttttatctgaacgtaaagacggt
ccgttcattccggtaaactgcggcgctatcccaggcgagctgctagaaagcgagctgttt
ggtcatgaaaaaggcgcctttactggcgccatcagcgcgcgtaaagggcgcttcgagcta
gccgaaggcggcacattattccttgatgaaatcggtgatatgccccttcaaatgcaggtt
aagttattacgtgtgttgcaagaacgtatgtttgaacgggtaggtgggaataagcccctt
caatgcaacgtacgcattatagctgcgacgcaccgcaatttggaaaccatgatcagtgaa
gacaagttccgtgaggacttgtattaccgactcaacgtattcccaatcgacagtcctgca
cttagacaaagaaaagacgatatccccttactactccaagagctaaatagtcgtatccaa
ggcgatggggtggaaggtgtgcgctttaccgagcaagcggttgcctcgttaatggagcac
gaatgggcggggaacgttcgcgaactttcaaatttagttgagcgattaaccattctttac
cctgggcaaattgttgatattgctgatttacccgaaaagtatcagtacggtgatgttcag
gcgtacgagcctgattatccagaagaaattcttgagcgtgaagcattcaatgcactcttt
gctgaagcggccgcgcaagagccagaagaagaccttaacgagcaaaaccacgagggtttc
aacggaatggtttcttcatctttacctgaggaaggggttaatctcaaagagtacctttct
gagttggaagtaaatctcattcgacaagcgttagacaatcaagattgggtggtggctcga
gctgccgacaaactcggaatgcgtagaacaacgcttgttgagaaaatgcggaaatacgat
attcagcgcactgaagaagcgtaa
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