Alteromonas mediterranea DE: MADE_1006080
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Entry
MADE_1006080 CDS
T00747
Name
(GenBank) BetI family transcriptional regulator
KO
K02167
TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amc03000
]
MADE_1006080
Transcription factors [BR:
amc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
MADE_1006080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_6
TetR_N
DUF5479
Motif
Other DBs
NCBI-ProteinID:
AEA97358
UniProt:
F2G416
LinkDB
All DBs
Position
1227309..1227869
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AA seq
186 aa
AA seq
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MEPVRKKQLIEATLEVMAEVGYHGTTISLISKRAGLSSGIISHYFGDKQGLIEATMRHLL
EALKITKRIDDPLKRIDFIIENNFSQTQGASSATNTWFNFWALSLHNEGLHRLQCINHKR
LERNLAFSYRKLLKPEQVKNAAASTAALIDGYWLRYSMGSVGNGDFTEEVTRCKQYVRDL
ITQYAK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggagccagttcgtaaaaagcagttaattgaagcaacgttggaggtgatggcagaggtt
ggctatcacggtacgacaatcagtctaataagtaaaagagcagggctttcttcaggaatc
attagtcattactttggcgataaacaggggctgatagaggcgactatgcgccaccttctc
gaggcactaaagatcaccaagcgcattgatgacccacttaaacgcattgacttcatcata
gaaaacaatttttctcaaacgcagggcgcgagttctgcaaccaatacgtggtttaacttt
tgggcattgtcacttcacaacgaaggcttgcaccgcttgcaatgtataaaccacaagcgc
ttagagcgtaatctcgctttcagctatcgcaaattgcttaaaccagaacaagtgaaaaac
gctgcggcatcgacagctgcgttgattgacggctattggttgcgttattcaatgggaagc
gtaggtaatggcgactttacagaagaggttactcgctgtaagcaatatgtgcgagatcta
attactcaatacgcgaagtag
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