Alteromonas mediterranea DE: MADE_1006470
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Entry
MADE_1006470 CDS
T00747
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MADE_1006470 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amc01007
]
MADE_1006470 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amc03016
]
MADE_1006470 (lysS)
Enzymes [BR:
amc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
MADE_1006470 (lysS)
Amino acid related enzymes [BR:
amc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MADE_1006470 (lysS)
Transfer RNA biogenesis [BR:
amc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MADE_1006470 (lysS)
Prokaryotic type
Other AARSs
MADE_1006470 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
Hia_Tpr_ring_dom
Motif
Other DBs
NCBI-ProteinID:
AEA97436
UniProt:
F2G4Y2
LinkDB
All DBs
Position
1311453..1313021
Genome browser
AA seq
522 aa
AA seq
DB search
MTDQQTDDNKLIAERRAKLSAIREQCRANGFPNSFRRENYADELQAKFGEFDKETLQEQG
NKVSIAGRIMAKRGPFMLLQDMTGRIQAYADKDTQKALKAKYGALDIGDIIGVAGDLHKS
GKGDLYVNMEQYELLTKALRPLPEKFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIV
NGIRNYLTERDYLEVETPMLQVIPGGATAKPFVTHHNALDIDMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSII
KNTTKDAEGNVTSEVEYDFGKPFDRLSMGEAILKYWPEADEAAIRDPEANLDSLKAMAKQ
LHIKEPEVDGIWGAGKYLCEIFEATAEEKLEQPTFITEYPWEVSPLARRNDNNPFITDRF
EFFVGGRELANGFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPTAG
EGIGIDRLAMLFTDSSTIKDVILFPHMKPQAPKDAQEAGEQA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccaacaaacagacgataacaaattgattgcagagcgccgtgccaaattgagc
gctattcgcgagcagtgccgtgccaacggtttcccaaacagcttccgtcgtgaaaactat
gcggatgagctgcaagctaagttcggtgaattcgacaaagaaaccttgcaagagcagggc
aacaaggtaagcattgctggccgtattatggcaaagcgtggtcctttcatgttgcttcaa
gacatgacaggccgtattcaagcttacgcagacaaagacacgcaaaaagcacttaaagca
aaatacggtgcgctagatattggtgacatcattggcgtagcgggcgacctgcacaagtca
ggtaaaggcgacctttacgtaaacatggagcaatacgagctgctaacaaaagcacttcgt
ccgttgccagaaaaattccacggtttgagcgaccaggaaaccaagtatcgccagcgctat
gttgacttgatcacaagcgaacaaacccgcaaaacctttatgatccgcagtaaaattgtg
aatggtattcgcaattacctgaccgagcgtgactacctagaagtagaaacgccaatgcta
caggttattccaggtggcgcgacggcgaagccgtttgtcactcaccacaatgcgctagat
atcgacatgtatctgcgtattgcgccagagctttaccttaagcgtttggttgttggtggc
tttgagcgtgtgttcgaaattaaccgaaacttccgtaacgaaggcttatcaacccgtcat
aaccctgagtttactatgcttgaattctaccaagcgtatgcagactacaacgacctgatg
aaccttaccgaagatatgctgcgcacgttagcggaagacattcttggtaccagcattatc
aagaacacaacgaaagacgctgaaggtaacgtaacgtctgaagtagagtatgactttggt
aagccgttcgaccgtttgagcatgggcgaggcgattcttaaatactggcctgaagctgat
gaagccgctattcgcgacccagaagcgaacctagattcgcttaaagcgatggcaaagcag
cttcatatcaaagagcctgaagttgacggtatttggggcgcgggtaaatacctgtgcgaa
atcttcgaagcaacagctgaagagaagcttgaacaacctacgtttatcactgaataccct
tgggaagtatcgccgctagcacgtcgtaatgacaacaacccgttcattaccgaccgtttc
gagttcttcgtaggcggacgtgaattagccaacggctttagcgagcttaacgacccagaa
gaccaagctgaacgttttgcaaagcaagttgaagaaaaagacgcgggcgatgatgaagcc
atgcactttgacgatgactatattcgtgcacttgagtacggcttaccgccaacagcgggt
gagggtattggtatcgaccgcctagctatgctatttaccgatagctcaactatcaaagac
gttatcttgttcccacatatgaagcctcaagcgccgaaagacgcgcaagaagccggtgag
caagcgtaa
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