Alteromonas mediterranea DE: MADE_1006580
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Entry
MADE_1006580 CDS
T00747
Name
(GenBank) TonB-denpendent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amc02000
]
MADE_1006580
Transporters [BR:
amc02000
]
Other transporters
Pores ion channels [TC:
1
]
MADE_1006580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
AAA_30
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
AEA97458
UniProt:
F2G504
LinkDB
All DBs
Position
1338122..1341169
Genome browser
AA seq
1015 aa
AA seq
DB search
MQQSNIATNRQPNKAIEKLHAFAWLAWCFSQNRGKIVMFRLVKAPLHIAPTLFLLLTHAP
LVYAQTTQVTATQPQTSINEFSFSIPAQNANEALTELAKQANTTLLFPFDLAKKVKTNAL
EGTFTLNEALSQLLKDTELAVVVDEAGMLSIRSRSSLLAKANQANKEEKASEEGNNGLEK
IAVVGTRNAPRSAVDSPVPLDVIGSKALRSQGNSDVLSMLSVMVPSLNVNDQPINDASSL
VRPANLRGMSSDHTLLLLNGKRRHRSAVITFLGGGLSDGAQGPDISIIPAYALKQVEVLR
DGASAQYGSDAIAGVINFVLKDAREGGSVALKLGGYSEGDGELFQIQLNNGFAIGDKGFL
NATAEYRQQNGTSRSVQRSDAQALIEQGNTFIQTPSQVWGALDVNEDIKLALNAGTAISQ
LTEFYSFATAARRKITGGFYFRNPQTREGVFSRTDPNTGESRLIVADLDGLENGIACPSI
TLSTNNVLQDPDYQRIADNTTELGANCFAFNEWFPGGFTPKFGGTITDASLAMGIRHELP
KGWAMDASATLGYSDIEYTISNTVNPSLGPRTPTSFSPGGVSQIERTLNLDFSKLIQSIF
EDPISIGLGAEWRKETYFQKAGDEASYIAGPFALEPPLGLSEGFSIGSNGFPGYQPQSAG
HWSRNNWALYADVELFLTEAMQVGLAARVEHFSDFGSTFDGKLSMRYKLNDTFALRGSVN
TGFKAPTVGQSNVINVTTAYGVNGLEDQATLPPTDLISLQLGATPLTPEESVNFSLGMVM
QASDNFFATLDYFNIRLSDRISTTSAIPLTEQDISALVAQGRPDAVKYNAAKYFTNDFDT
KTQGVDLVVNYSFSYNDWANALLLAYNWTDTQVERLTLYPALVNDEMQLLPNLTPSRIRM
LEDNLPAHRGSVTLEQVKDNWALTWRLNYYGEFYEDHLDASAGMDIYGSALTTFDAQLAW
KVQPHIQLTLGAQNLFDALPDENPFQGEVGALYPPTSPGGINGAFYYAGIEYTFN
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacagagcaacattgcaacaaacaggcaacctaataaagcaatagaaaagctgcat
gcttttgcatggctggcttggtgcttttcgcaaaatagaggcaaaatagtgatgtttcgc
ttagtaaaagcgcctctgcacattgcgcctactttgtttttgcttcttacacatgcccct
cttgtgtacgcacaaaccactcaagttacagccacacaaccacaaacatcaattaacgag
tttagtttttcgattcctgcgcaaaatgccaacgaggcccttacggagcttgcaaaacag
gccaataccactttgttatttccgtttgatttagctaaaaaagtgaaaacgaatgcactt
gaaggcacgtttacgcttaacgaagccttgtctcaacttttaaaagatacggaacttgcc
gttgttgtggatgaagcgggtatgctgagtattcgctcccgctcgtcgttactagcgaag
gctaaccaggcgaacaaggaagaaaaagcgtcagaagagggcaataatggcttggaaaaa
attgcggtagttggcaccagaaatgcgccgcgaagtgcagtagactctccggttcccctt
gatgttattggttcgaaggcgctgcgttcgcaagggaatagtgacgtgctttctatgctt
agcgtgatggtgccgtcattaaatgttaatgaccagccgattaacgatgccagtagcctt
gtaagacctgcgaatttaagaggcatgtcgtcagatcacacgttgttattacttaacggg
aagcgtagacaccgatctgcggttattacctttctcggcggtggcctgtctgacggtgca
caagggcctgatatatcaattatacctgcttatgcgttaaagcaagttgaggtgctgcga
gatggtgcatccgcacaatatggttccgatgctatcgcaggcgttattaactttgtgcta
aaagatgcgcgagaaggggggagcgttgcccttaagttaggtgggtacagtgaaggtgat
ggcgagctttttcaaatacagcttaacaatgggtttgccataggcgataaaggcttttta
aatgcgacggctgagtacaggcagcaaaacggcacctctcgttctgtacaacgcagtgat
gcacaagcgcttatcgaacaaggtaatacatttatccaaacgccgtctcaagtttggggc
gcattagacgttaacgaagatatcaaactagccttaaatgccggcactgctatttctcaa
ttaacagaattttatagttttgctacagcagctagacggaaaataaccggtggtttctat
ttccgaaacccgcaaactcgagaaggcgtgtttagccgaactgaccccaacacgggggaa
agccgtttaattgtggcggatttagatggattggaaaacggcatagcgtgcccgtctatt
acgctttctactaacaacgtattgcaagaccctgattatcagcgaatagctgataacacc
accgaacttggggcaaattgttttgcttttaatgagtggtttccaggcggtttcacgcca
aaatttggcggcaccattaccgatgcctcgctggccatgggaataagacatgaattgccc
aaaggctgggcgatggatgcgagtgccactttaggttacagtgatatcgagtacaccata
tcgaatacggtaaacccgtcgttagggccccggacacccacttccttttcgccaggcggt
gtatcacaaatagagcgaacccttaacctcgattttagcaagcttattcaatccattttt
gaagacccaattagcataggcctcggtgctgaatggcgcaaagaaacctatttccagaaa
gccggtgatgaagcgtcctacattgctgggccttttgcccttgagcctccgttggggtta
agcgaagggttttcgattgggtcgaacggttttccagggtatcagcctcagtcagctggg
cattggagccgcaataactgggcattgtacgccgacgtagagctgttcctaactgaagcg
atgcaggttggactggctgctagagttgagcattttagtgactttggctctacctttgac
ggcaaattgagcatgcgttataaacttaacgacacctttgcattgcgagggtcagttaat
acaggcttcaaagccccgacagtgggccagagcaacgtgattaatgtaacaactgcttat
ggcgttaatgggcttgaagaccaagccaccttgccgccaacggacctcatttcattacag
ctcggcgcgacaccacttacaccagaagaatcggtcaatttcagtctgggcatggtcatg
caggcaagcgacaactttttcgcaacgctcgactatttcaatattcgcctctcagatcgc
atcagtaccacctcagcgattccgttgactgaacaagatattagcgcgctggttgcacag
ggaaggccagatgcagttaagtacaatgcagcaaaatactttactaatgattttgatact
aagacccagggcgtagatttagttgtaaactacagtttttcatacaatgactgggctaac
gcgttattactcgcttacaactggacagatacgcaggtggaacgccttacgctttatcct
gcactagttaacgatgaaatgcagcttttgcctaacttaacgccgtcgcgcattcgtatg
ctagaagataacctcccggctcacaggggaagcgttacccttgagcaagtcaaagataac
tgggcgctaacatggcgattaaactactatggtgagttttacgaagaccacctcgatgca
tcggcgggaatggatatatacggcagtgcattaacgacgtttgacgcgcaactcgcttgg
aaagtacaaccacacattcagcttacgttaggcgcgcaaaacttgttcgatgcactgcct
gacgaaaacccgtttcaaggcgaggttggcgcgctttatccacctacatctccaggcggc
attaacggcgctttttattacgcaggcatcgaatacacctttaattaa
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