Alteromonas mediterranea DE: MADE_1006675
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Entry
MADE_1006675 CDS
T00747
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amc03000
]
MADE_1006675
Transcription factors [BR:
amc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MADE_1006675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
DUF508
DUF480
Motif
Other DBs
NCBI-ProteinID:
AEA97477
UniProt:
F2G5Q6
LinkDB
All DBs
Position
1361120..1362046
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AA seq
308 aa
AA seq
DB search
MLNRLQESDIKLLRVFYAVASCNGFTAAEPVLRMQRPNISAAIKKLEERLDLVLCHRGRG
GFQMTKEGEVVFQETKRIFNAFDNFVFNLKSLHDDYSGHITLVLMAGLPLSMHLAVSKAV
KSTMKKFDDIHVNIQTRLYNEVEHVALSGECHLVVSTYDMVKPESVTFHPIGIETEGRLY
CAPTHPLAKYRDTDLPEGVKIGDYPAIGIAGLSSANYIEDETRLSIQTFSDSFDAAMSAI
MTGEYIGLLPDYMAKEQGAALGLVPIAKGSLFNFSHELFVMNGKNTRLNPVLRHCIKELS
YFISESQK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatcgtcttcaggagtcagatataaagctacttcgtgtattttacgctgtagcg
agctgcaacggatttactgcggcagaacccgtgttgcgcatgcaacgccctaatatcagt
gcagcgatcaagaaactggaagagcgtctagatttggtgctatgtcatcgcggtcgtggt
ggctttcagatgacaaaagaaggtgaagtcgtttttcaggaaacaaaacgcatcttcaat
gccttcgataactttgtattcaatctcaagtcgcttcacgatgattattctggccatata
acgcttgtgttaatggcaggtcttccgctatcaatgcaccttgctgtaagtaaagcagtg
aaaagcaccatgaagaagtttgatgatattcacgtcaatatccaaacccgtctctataat
gaagttgaacatgtggcgttgtctggtgaatgtcaccttgtggtttcaacgtatgacatg
gttaaacccgaatcagtgaccttccacccaataggtattgaaactgaagggcgcctttac
tgtgcaccgacccatccactggcgaaatatcgtgatacagacttgccagaaggggtaaaa
ataggcgattacccagcgattggtattgccgggctctcttcggctaactatattgaagac
gaaactcgattatcgatacaaacattttctgactctttcgatgcggccatgtccgcaatc
atgacaggggaatatatcgggttgttacctgattatatggcaaaagagcagggcgctgcg
ttaggactagtgcctattgctaaaggaagtttgtttaatttcagccacgaattgtttgta
atgaatggcaaaaacacgcgattaaacccagtgcttcgccactgcattaaagagttaagt
tactttatctctgagagccaaaagtaa
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