Alteromonas mediterranea DE: MADE_1006925
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Entry
MADE_1006925 CDS
T00747
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amc03009
]
MADE_1006925
Enzymes [BR:
amc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
MADE_1006925
Ribosome biogenesis [BR:
amc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MADE_1006925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
PP1_inhibitor
Motif
Other DBs
NCBI-ProteinID:
AEA97527
UniProt:
F2G5V6
LinkDB
All DBs
Position
1547903..1548799
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AA seq
298 aa
AA seq
DB search
MTEKLQKVLANQGLGSRREMERWIEEGRVSVNGSVATLGDRVDHTAQIRVDGHLLSRQTE
QPICRVLMYNKPEGELCSRHDPEGRDTVFDRLPAIRLGRWITVGRLDMNTSGLLLFTNDG
ELANRLMHPKCEVEREYAVRVFGEVSTKTLNTLQKGVELDDGEAKFLTISGTPTPQHAEE
ESMNRWFNVTLKEGRNREVRRLWESQGVQVSRLIRVKYGPIELQKRLPQGAWVELGLEDV
NALRNHVQLPDETQTMVNVRQGKLDHARLSRMRRSVKKHKVRKQQGLNKRAGRPAKRK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaagttgcaaaaagtactggctaaccaagggctaggctcgcgacgagaaatg
gaacgttggattgaggaaggccgagtatcggttaacggttccgtagcgacattaggtgat
agagttgaccacactgcgcaaattcgcgttgatggccatcttttatcacgtcaaaccgag
cagccaatttgtcgagtgttgatgtacaacaagccagaaggtgaactgtgtagccgtcac
gacccagaaggtcgagatacggtgtttgaccgtctgccggctattcgtctagggcgctgg
attaccgttggccgtttagacatgaacaccagtggtttgcttctgtttaccaacgatggt
gagcttgcaaaccgcttaatgcatcctaagtgcgaagtagaacgtgaatacgccgtacgt
gtgtttggtgaagtttcgaccaagacactaaacacacttcaaaaaggggtagagctagac
gacggtgaagccaaatttctaacaatatcgggtacgcccacgccacagcatgctgaagaa
gaaagcatgaaccgttggttcaacgtgaccttgaaagaagggcgtaaccgtgaagttcgc
cgtctttgggaatcacaaggcgtacaagttagccgccttatccgtgttaagtacggccca
atcgagcttcaaaaacgtctgccgcaaggtgcgtgggttgagctagggctagaagacgta
aacgcgcttcgcaatcatgtacagctgcctgatgaaacgcagactatggtgaacgttcga
caaggtaaactcgaccacgctcgtttaagtcgtatgcgccgctcagtgaaaaagcataaa
gttcgcaagcaacagggccttaataaaagagcgggtcgcccagcaaagcgcaaataa
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