Alteromonas mediterranea DE: MADE_1007095
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Entry
MADE_1007095 CDS
T00747
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc00220
Arginine biosynthesis
amc00240
Pyrimidine metabolism
amc00250
Alanine, aspartate and glutamate metabolism
amc01100
Metabolic pathways
amc01110
Biosynthesis of secondary metabolites
amc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
MADE_1007095 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MADE_1007095 (carB)
00220 Arginine biosynthesis
MADE_1007095 (carB)
Enzymes [BR:
amc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
MADE_1007095 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AEA97561
UniProt:
F2G6M4
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All DBs
Position
1611309..1614530
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AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALELDKHGVLEEFGCELIGATA
DAIDKAENRERFDQAMKNIGLECPRAEIAHSMDEAHDVLSRIGFPCIIRPSFTMGGTGGG
IAYNIDEFNEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKADNCIIVCTIENFDPM
GVHTGDSITVAPAQTLTDKEFQIMRNAAMAVLREIGVETGGSNVQFGVDPKTGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGLTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGASGLNPMVDLEDPES
RNKVVYELRQPGAERIWYIGDAFRMGMSVEEVFNLTNIDRWYLVQLEDLILLEAKVAELG
LPGIDADFMRALKRKGFSDARLAELTKVAESDIREARRGFGISPVYKRVDTCAAEFSTST
AYMYSTYDEECEAAPTDKEKIMVLGGGPNRIGQGIEFDYCCVHAALSMREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVAKEQPKGVIVQYGGQTPLKLARALEAAGVPV
IGTSPEAIDRAEDRERFQQMVNKLNLKQPANATVTNVEQALTMAEEIGFPLVVRPSYVLG
GRAMEIVYDIKDLKRYLNEAVKVSNDAPVLLDRFLDDAIEVDIDAICDGKEVVIGGIMEH
IEQAGVHSGDSACSLPPHSLPKDIQDVMREQVKAMALELGVVGLMNTQFAIKDGEVYLIE
VNPRAARTVPFVSKATGIPLAKVAARAMAGVSLAEQGVTEEVIPPFYSVKEVVLPFAKFQ
GVDPLLGPEMRSTGEVMGVGDTFEEAYAKANLGAGAPLPKEGKALISVRETDKPKIIELA
KALVAAGFSIEATRGTATTLYDAGIMSTVVNKLSEGRPNIVDAIKNGEYAYLINTTEGRQ
AITDSVYIRREALVNKVTYTTTMNAAFATIRAKSADDRNKVASVQELHARLKH
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtaccgacataaaaagtattcttatcattggtgctggccctattgtaatc
ggccaggcttgtgaattcgactattcaggcgcgcaagcgtgtaaagcccttcgcgaagaa
ggctaccgtgttattttggttaactctaacccagcaaccatcatgaccgacccagaaatg
gcagatgcgacttacatcgagcctattcactgggaagtagtacgcaaaattatcgaaaaa
gaacgtccagacgccattcttcctactatgggtgggcaaacagcccttaactgtgcgcta
gagcttgataagcacggtgtactagaagaatttggctgtgagcttattggcgcaacggct
gacgctatcgataaggcggaaaaccgtgaacgctttgaccaagcgatgaaaaacattggc
cttgagtgtccacgtgcggaaatcgcccacagcatggacgaagcgcacgatgtgctaagt
cgcatcggcttcccatgtatcattcgtccttcattcaccatgggcggaaccggcggtggt
attgcctacaacattgatgagttcaatgaaatttgtacccgcggcctcgacctttccccc
accaacgaacttcttattgatgagtcgttacttggctggaaagaatacgagatggaagta
gtacgcgataaggcagataactgcattattgtttgtacaattgaaaacttcgatccaatg
ggggttcatacgggcgactctatcactgttgccccagcgcaaacccttaccgacaaagaa
ttccagattatgcgtaatgcagcgatggctgtactacgtgaaattggtgttgaaaccggt
ggttcaaacgtacagtttggcgtagaccctaaaaccggtcgtatggttatcatcgaaatg
aacccgcgtgtatcgcgttcatcggcgctagcctctaaagcaacgggcttcccgattgcg
aaagtggctgcgaagttagcagtaggttacaccctagatgagctagctaacgacatcact
ggcggtttaacgccggcgtcgtttgaaccgtcaatcgattacgttgtcactaagatccct
cgcttcaactttgaaaagtttgccggtgctaacgaccgtctcaccacacagatgaagtca
gtgggcgaggtgatggcgattggtcgtaaccaacaagagtcgttacaaaaagcccttcgt
ggtcttgaagttggtgcgtcaggtttgaacccaatggttgaccttgaagaccctgagtcg
cgcaataaagtcgtttacgaacttcgccagccgggtgcagagcgtatttggtacattggc
gatgcattccgtatgggcatgagcgttgaagaagtgttcaaccttaccaatattgaccgc
tggtatttagtgcagctagaagatcttattcttcttgaagcgaaagtggcagaacttggt
ttgccgggtattgatgctgactttatgcgcgcgctaaagcgcaaaggtttctcagatgca
cgtcttgctgagctgaccaaagtggcagaaagcgatattcgtgaagctcgtcgcggtttt
ggcatttctccagtgtacaagcgcgtagatacgtgtgccgcagagttctctaccagcacg
gcttatatgtattcgacctatgacgaagagtgtgaagctgcgccaaccgataaagagaaa
atcatggtattgggcggtggccctaaccgtatcggtcaaggcattgaattcgattattgc
tgcgttcacgcggcgctttcaatgcgtgaagacggttacgagaccattatggttaactgt
aaccctgaaacggtgtctactgactacgacacgtcagatcgcttgtatttcgaaccagta
acgctggaagatgtacttgaaatcgttgctaaagagcagccaaaaggcgttatcgtacag
tacggtggtcaaacgcctcttaaacttgctcgtgccctagaagcagcaggcgtaccggtt
atcggtacctcacctgaagcgattgaccgtgctgaagaccgtgagcgtttccagcaaatg
gtgaacaagcttaatcttaagcagcctgcgaatgcgacagtaactaacgtcgagcaagcg
ctaactatggctgaagagattggcttcccgctggttgttcgtccaagctacgtgttaggt
ggacgtgcgatggaaatcgtttacgacattaaagaccttaagcgttatctaaacgaagcg
gttaaagtgtctaacgacgcgcccgtattgctagaccgtttcctagatgacgctatcgaa
gtggatatcgatgctatatgcgacggtaaagaggttgtgattggcggtatcatggaacac
atcgaacaagcgggtgttcactctggtgactctgcatgttcactgcctccgcattcactc
cccaaagacatccaggacgtgatgcgcgagcaggtaaaagccatggcgctagagcttggc
gtagtggggctaatgaatacccagtttgcgataaaagacggcgaagtttacctaatcgag
gttaacccgcgtgcagcgcgtacggtacctttcgtatcaaaagccacgggcattcctctt
gctaaagttgcggcacgtgcaatggcgggcgtaagcttggcagagcagggcgtaactgaa
gaagtgatcccacctttctactcggtgaaagaagtggtacttccgtttgctaagttccaa
ggtgttgacccactgttaggcccagaaatgcgctcaactggtgaagttatgggtgttggc
gatacgtttgaagaagcgtacgctaaagcgaaccttggcgcaggcgcgccactgccgaaa
gaaggtaaagcacttatctctgtgcgtgaaactgacaagccgaaaattatcgagctagct
aaggcccttgttgcggctgggttcagtattgaagccacgcgcggtacagcaacgaccttg
tacgatgcaggtataatgagcacggtggtgaataagctatctgaaggccgacctaacatt
gttgatgctatcaaaaacggtgaatacgcttatttgataaatacaacagaaggtcgccaa
gcgattaccgattcagtttacatacgtcgtgaagccttggtgaacaaggttacctatacc
accacgatgaatgcagcgtttgcaactattcgcgctaagtctgctgatgaccgcaataaa
gtggcttcagttcaagaactgcacgctaggcttaaacactga
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