Alteromonas mediterranea DE: MADE_1007155
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Entry
MADE_1007155 CDS
T00747
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amc03016
]
MADE_1007155
Enzymes [BR:
amc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
MADE_1007155
Transfer RNA biogenesis [BR:
amc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
MADE_1007155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AEA97573
UniProt:
B4S0R8
LinkDB
All DBs
Position
complement(1625860..1627293)
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AA seq
477 aa
AA seq
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MTKKLYIKTWGCQMNEYDSEKMADLLDSTHGFSAAQSAEEADVILLNTCSIREKAQEKVF
HQLGRWKTLKQDKPELIIGVGGCVASQEGDTIRQRAPFVDLVFGPQTLHRLPEMINELKG
GAKSVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTFCVVPYTRGEEVSRPVDD
VLLEIAQLAGQGVREVNLLGQNVNAYRGENYDGTICRFSELLELVAAIDGIDRIRYTTSH
PVEFTDDIIDAYASIPELVDHLHLPVQSGSDRILNLMKRGHTALEYKSKMRKLKKIRPNI
SLSSDFIIGFPGETDADFEATMDLIQAVDYDLSFSFIYSARPGTPAADAVDDVTEETKKQ
RLHLLQQRITQQALRIARHMVGTEQRILVEGPSKKNPMELSGRTENNRVVNFEGTPDMIG
EFVDVNITDVFTNSLRGEVVRRESEMGLRVAVSPQSIMAKHQADMPDELGVGQFSPA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaagctgtatatcaaaacctggggctgccaaatgaacgagtacgactcggag
aaaatggcagacttactagactcaacacacggctttagcgctgcacaaagtgctgaagaa
gccgacgttattttgcttaacacctgctctatccgcgaaaaagcgcaggaaaaagtgttt
catcaacttggccgttggaaaaccctcaagcaagataagccagaacttattattggtgta
ggtggctgtgtagcctcacaagaaggcgacactattcgtcagcgcgcgccattcgtagac
ttggttttcggcccgcaaacactacaccgcttgcctgaaatgattaacgaacttaaaggc
ggcgcaaagtcagtgattgacgtgagcttccctgaaattgaaaagtttgatcgcctgcct
gagccgcgcgctgaaggcccaaccgcgttcgtttccattatggaaggctgttcaaaatac
tgtacattctgcgtagtaccttacacccgtggtgaagaggtaagccgccctgttgatgac
gtattgcttgaaattgcacagcttgctggccaaggcgtacgtgaagtaaaccttcttggt
caaaacgtaaatgcataccgcggtgaaaactacgacggtacgatttgtcgtttctctgag
ttacttgaactcgttgcagctatcgacggtatcgaccgcattcgctacaccacgtcgcac
ccggttgaattcaccgacgacatcatagatgcgtacgcctcaattccagagcttgttgac
caccttcacctaccggttcaaagtggctcagaccgcatattgaaccttatgaagcgcggt
catacggcattagaatacaaatctaaaatgcgtaagctgaaaaagattcgcccgaacatt
agtttgtcgagcgactttatcattgggttccctggtgaaaccgatgctgactttgaagcc
accatggatttgattcaggccgttgattacgatcttagcttcagcttcatttatagtgcc
cgccctggtacaccagcggctgatgctgtcgacgatgtaacggaagagaccaaaaagcag
cgtcttcaccttctacagcagcgtattacgcaacaagcattgcgcattgctcgtcacatg
gtaggtacagagcagcgtattctggttgaaggtccgtcaaagaaaaacccaatggagctt
tctggacgtactgaaaataaccgggtggtaaactttgaaggcacacctgacatgattggc
gaattcgttgatgtaaacatcaccgacgtgtttaccaactcactacgtggtgaagttgtg
cgcagagagagtgagatgggcttgcgtgttgccgtttcgccccaatctattatggcaaag
catcaggcagatatgcccgatgagcttggcgtgggtcaatttagcccagcctaa
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