Alteromonas mediterranea DE: MADE_1008660
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Entry
MADE_1008660 CDS
T00747
Name
(GenBank) 23S rRNA pseudouridylate synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amc03009
]
MADE_1008660
Enzymes [BR:
amc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
MADE_1008660
Ribosome biogenesis [BR:
amc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MADE_1008660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
GO-like_E_set
RluD_N
Motif
Other DBs
NCBI-ProteinID:
AEA97870
UniProt:
F2GA76
LinkDB
All DBs
Position
1896816..1897775
Genome browser
AA seq
319 aa
AA seq
DB search
MGYTWPMKEEAPIKVRFVTVDADLAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKGR
VKPEYKLQADDIVRIPPVRVSEGAPAPSPKLDKIAALESHILFEDDRILVMNKPSGMAVH
GGSGLSFGLIEGLRALRPDAKFMELVHRLDRDTSGCILIAKKRSALRHMHEQLRTGKMDK
RYNALVSGEWPKNRFKVKAPLRKNVLQSGERMVSVSDDGKPSETRYRILEEYAGATLVEA
SPITGRTHQIRVHCLHAGHPIACDPKYGDADFDASMRQKGLNRLFLHARSISLLHPATEE
RVTFSAPLDPTLSNTLKAL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggggtatacttggcccatgaaagaagaagccccaataaaagtacgttttgtaacggtt
gacgccgatttggctggtcaacgtatcgataattttttgcgcacccagctaaagggcgtg
ccgaaaagcatgatctatcgcattttgcgcaaaggcgaagtgcgagtgaataaaggccgc
gttaagcctgaatacaagttacaagctgatgacattgttagaattccgcctgttcgtgtg
tcggaaggggcgcccgcgccttcgcctaaactcgacaaaattgctgcgttagagtctcat
attctatttgaagacgatcgtatcctggtgatgaataaaccatcaggtatggccgtgcac
ggcggcagcggtttaagtttcggtttaatagaaggtttacgtgcgttacgccctgacgcc
aagtttatggaactggtccatagattagacagagatacctcgggctgcatattaattgca
aaaaagcgttctgcacttcgtcatatgcacgagcaactgcgcacggggaaaatggacaaa
cgctacaacgcccttgtttcgggtgaatggcctaagaatcgttttaaggtgaaagcgccg
cttcgcaagaatgtgcttcaatctggcgagcgaatggttagcgtgagcgacgatggtaag
ccctcagaaacgcgctaccgcattttagaagagtatgcgggggcgacattggtagaagct
tcgccgataacaggcagaacacaccaaattcgcgttcattgcttacatgctggccatccg
attgcctgcgaccctaaatacggtgatgcggattttgatgcttcaatgagacaaaagggg
ctaaatagattgttccttcatgcacgcagcatctcgttgttgcatcctgcaacagaagaa
cgggtgacattttctgcacctttagaccccacactttcaaatacgcttaaagcactgtaa
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