Alteromonas mediterranea DE: MADE_1008890
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Entry
MADE_1008890 CDS
T00747
Name
(GenBank) TonB-denpendent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amc02000
]
MADE_1008890
Transporters [BR:
amc02000
]
Other transporters
Pores ion channels [TC:
1
]
MADE_1008890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AEA97916
UniProt:
F2GAC2
LinkDB
All DBs
Position
1937227..1939932
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AA seq
901 aa
AA seq
DB search
MKFKTRKTAVAAMVGTALLCSPYLVSAQETDADKEQEAKKDVELILVTGSFVRRSENFES
PSPLAVVDSVAIDAIGAKNIADITQTLTINTGAENNPDAFTQNATAGTSNINLRGLGVAS
TLVLLNNKRQVVTAQPTNEGLNFVDTSSLVPMIAIDRMEVVKDGASALYGSDAVAGVVNF
ITKRNYDGAMVSVDYQDGAHGDNKEYILQGLWGATGDNGSVLAAISYTNRSPLFLSDRRL
SRPQDDTSALGNPGSYFLNIPGAGPLPIIDPYGCEEFGGAPDLRAPSGTIPGLEVGFCGF
DFGKFYSYVADESRTNAYVRADYEFDNDITWTAEFSTARNRAERGGAPSFPILTSPIVPD
YHPQNPFGQSVAFFGRAEGNGFEGDPANTESDTLRFSTSLQGVTDTGFWEVSYTRAVNDF
VFRVPDVLNTEFQLALYGLGGSNCDPIAGSPGVGNCEFFNPFATSYTSAPNSDYVVSSFT
GTEVIDSKADLEVFEAFTSFDVFEMGGGFAALALGVQYRENQLSQDYDDLANQDSFTFVI
GNPDIDGSQDVWAAFGELALPINDELDVQLAVRYEDYGGSIGSTVDPKLAVSWRATDEFS
FRGSISTSFRAPTVFLAQGGATSLQQLIDPVQGAVAFVAVRTSGNEDLKPEESTAYNIGF
SYEPFRDFSIEVDYWNFEFEDLIIQENAQAVLNEDPTNPDRVIRAGDPLTGPALQVNNTY
VNASSLETSGLDFVTSYKIETDFGSFTPSLNATYITKYDLMDPQAGNIDGAGRRNFNNIG
VSSPELRANLGLAWKNDIHAANVFLRYISSYDDDQNCDDGTANLGGCAGGFYEVDSHLTV
DAQYNIDLGGLYDTEQSYVLTLGAINMFDEEPPQLFTNSGFDSKVHDPRGRQIYARLAIE
F
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaaacgcgtaagaccgcagttgccgctatggttggcactgctttactttgc
tcaccttatttagtttcagcacaagaaactgacgcagataaagagcaagaagcaaagaaa
gacgttgaacttattctagttaccggcagtttcgtgcgccgaagcgagaacttcgaatca
ccctcaccgctggccgttgttgatagcgtggctattgatgcaattggcgcaaagaatatt
gctgacattacacaaacacttaccattaacacaggtgctgaaaacaacccagacgcgttt
acgcaaaacgcgactgctggcacatctaatattaaccttcggggccttggtgttgcctcg
accttggtcctgctaaataacaagcgccaagtagttaccgctcagcccactaatgaaggc
ctcaactttgtagacactagttcattagtacctatgattgccatcgaccgcatggaagta
gtgaaagatggagcatcagccctttacggttctgacgcggttgccggtgtagttaacttt
attactaaacgaaactacgacggtgcaatggtaagcgttgattatcaagatggggcccat
ggcgataataaagagtatattctacaggggttgtggggagctactggagacaacggaagc
gtacttgctgcaatcagctataccaaccgctcgccactgtttttaagcgatagacgctta
agtcgtccgcaagatgacaccagtgccctaggaaatcctggctcttattttttgaatatt
cctggagcgggtccacttccaataattgatccatatggatgtgaagagttcggcggcgcg
ccagatctcagagcacctagcggcacgattcccggcttagaagtaggcttttgtggcttc
gattttggtaaattttattcgtatgttgccgatgaaagtcgaaccaatgcctatgttcgc
gccgattatgagtttgataacgatataacttggacagcggaattcagtaccgcaagaaac
cgtgcagagcgggggggagcaccaagcttccctatcttaacttcgcccatcgttcctgat
tatcacccgcaaaacccgtttggccagtctgtggcctttttcggaagagcagaaggaaac
ggctttgaaggcgacccagcgaataccgaatctgacacccttcgttttagcaccagctta
caaggtgtcaccgacacagggttctgggaagtaagttatacccgagcagtgaacgatttt
gtgttcagagtacctgatgtattaaacacagagttccagctggcactttatggccttggc
ggttcgaactgtgatcctatagcagggtcgcccggggtagggaattgtgagttctttaat
ccgtttgctacctcttatacatcggcccccaattctgattatgtcgttagttcatttacg
ggcacagaggtaattgattctaaagctgacttagaagtcttcgaagctttcacttcgttt
gatgtctttgaaatgggcggtggatttgcggctttggcgctaggagtgcagtatcgagaa
aaccagcttagtcaagattatgatgacttggcgaatcaagacagcttcaccttcgtgatt
ggtaaccccgatattgatggtagccaagacgtatgggcggcgtttggtgaattagcctta
cctattaacgacgaattagacgttcagcttgccgtgcgttatgaagattacggtggctca
ataggtagtactgtcgacccgaaactcgcggtctcgtggcgcgcaaccgatgaattctcg
ttccgtggatcaatttctacctcatttagagcgcctacggtcttcctagcgcaaggcggg
gctacgtcgttacagcagttaattgaccctgttcaaggggccgtcgcttttgttgcggtg
cgaacgtcgggtaatgaagatttgaaacctgaagaatctaccgcctataacattggcttc
tcttacgagccattcagagatttttctatagaagttgattattggaattttgaatttgaa
gacttgatcattcaggagaatgcgcaagcggtactcaatgaagacccgacgaatcctgac
cgagtcattcgcgcgggcgatccgttgaccggcccagcgcttcaggtgaacaatacctat
gttaacgcaagctcacttgaaacatcgggtcttgattttgtgaccagctataaaattgaa
accgactttggtagcttcacgccgtcacttaatgctacctatattactaaatatgacctt
atggacccacaggcaggtaatatagacggcgcagggcgtcgtaactttaacaacatagga
gtatcttcccctgagctgcgcgcgaatttaggcttggcttggaagaatgacatccatgct
gccaatgtcttcttgcgctatatttcgtcgtatgacgatgaccaaaactgtgatgacggc
acagctaacctaggcggttgtgcgggcggattttacgaagtggatagccacctaacggtt
gatgcgcaatataacattgaccttggcggtctttatgatactgagcagagttacgtgtta
acccttggtgcaatcaatatgtttgatgaagaaccccctcagctatttaccaatagtggt
tttgactcaaaagttcacgacccgcgaggccgacaaatctatgcgcgtttagctattgag
ttttaa
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