Alteromonas mediterranea DE: MADE_1009485
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Entry
MADE_1009485 CDS
T00747
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc00020
Citrate cycle (TCA cycle)
amc00190
Oxidative phosphorylation
amc00650
Butanoate metabolism
amc00720
Other carbon fixation pathways
amc01100
Metabolic pathways
amc01110
Biosynthesis of secondary metabolites
amc01120
Microbial metabolism in diverse environments
amc01200
Carbon metabolism
Module
amc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amc_M00149
Succinate dehydrogenase, prokaryotes
amc_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MADE_1009485 (sdhA)
00650 Butanoate metabolism
MADE_1009485 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
MADE_1009485 (sdhA)
00720 Other carbon fixation pathways
MADE_1009485 (sdhA)
Enzymes [BR:
amc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MADE_1009485 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AEA98035
UniProt:
F2GC19
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All DBs
Position
2139497..2141269
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AA seq
590 aa
AA seq
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MSLPVHEFDAVVIGAGGAGMRAALQISQSGKSCALLSKVFPTRSHTVSAQGGITVALGNS
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAIIEMENMGLPFSRFENGKIYQRPFG
GQSKNFGGEQGARTAAAADRTGHALLHLLYQQNVKNKTKVFSEWYALDLVKNQDGDVVGC
TAIDIESGEVVYFKSRAVVLATGGAGRIYASTTNAHINTGDGVGMALRAGVAVQDMEMWQ
FHPTGIAGAGTLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMTEIREG
RGCEGPWGTHIKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTNVDGQCLTVDENGNDKVVNGLFACGEIACVSVHGANRLGGNSLLDLVVFGRATGLHLG
KTLSDMAPTRDASESDLEASMARFNRWENSEKGKGEDPVQIKKDLQECMQLNFSVFREGD
AMAEGLKELSEIRERLKNARLDDKSSDFNTQRIECLELDNLMETAYSTAVAANFRTESRG
AHSRFDFPDRDDDNWLCHSIYDPNTDKMIKREVNMAPKLREAFPPKVRSY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacccgttcacgagtttgatgcagtagtaattggtgccggcggtgcaggtatg
cgcgcagcactacagatttcgcagtctggtaaatcttgcgctctgctttcaaaagtattt
ccaacccgttctcacactgtgtctgcacaaggtggtattaccgtagcattgggtaattca
cacgaagacaactgggaatggcacatgtatgacaccgtaaaggggtcagattatatcggt
gaccaagacgctatcgaatacatgtgtaagacaggacctgaagcaatcattgagatggag
aacatgggtcttcctttctctcgcttcgaaaacggtaaaatttaccagcgtccttttggt
ggtcagtctaagaactttggtggcgagcagggtgctcgtacggcagcagcggctgaccgt
accggtcacgcacttcttcaccttctttaccaacaaaacgtaaagaataaaacaaaagta
ttttctgagtggtacgcgctagatttagtgaaaaaccaagacggtgacgtagtaggttgt
acagcaatcgacatcgaatctggcgaagtagtttacttcaagtcgcgcgctgttgtactt
gcaacgggtggtgcagggcgtatctatgcgtctaccacaaacgcacacatcaataccggt
gacggtgtgggtatggcgcttcgtgcaggtgttgcagttcaggatatggaaatgtggcag
ttccacccaacgggtattgctggcgcaggtacattggttactgaaggttgtcgcggtgaa
ggtggttacctactaaacaaagacggcgagcgcttcatggaacgttatgcgccaaacgcg
aaagaccttgctggtcgtgacgttgttgcgcgttcaatgatgacagagattcgcgaaggc
cgcggttgtgaaggaccatggggtacacacattaagcttaagcttgatcaccttggtaaa
gacgttcttgaatcgcgtctacctggtatccttgagctatcccgtacgtttgcacacgtt
gacccagtaaaagagccaattccagtaattcctacttgtcactatatgatgggtggtatt
ccaacgaacgttgatggccaatgtctaacggttgatgaaaacggtaacgacaaagttgtt
aatggtctatttgcttgtggtgagattgcttgtgtatcggtacacggcgctaaccgcctt
ggcggtaactcgctacttgaccttgttgtattcggtcgtgcgactggtttacaccttggt
aagacattatctgatatggccccaacgcgcgacgcgtcagaatctgatcttgaagcgtca
atggctcgtttcaatcgttgggaaaattcagaaaaaggcaagggcgaagacccagtccaa
attaagaaagatttgcaagaatgtatgcagcttaacttctcggtattccgtgaaggtgac
gcaatggcggaaggacttaaagagcttagcgaaattcgtgagcgcctcaagaatgctcgc
cttgacgacaagagttcagacttcaatacccaacgtatagagtgtttagaacttgataac
cttatggaaaccgcgtacagcacggcagtagcagcgaatttcagaacggaaagccgtggc
gcacacagccgcttcgacttcccggaccgagatgatgataactggctatgtcacagcatt
tatgatccgaacacggataaaatgattaaacgtgaagtgaatatggcgcctaagcttagg
gaagcattcccgcctaaagtgcgttcatattaa
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