Alteromonas mediterranea DE: MADE_1009840
Help
Entry
MADE_1009840 CDS
T00747
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amc03000
]
MADE_1009840
Transcription factors [BR:
amc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MADE_1009840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AEA98106
UniProt:
F2GCQ0
LinkDB
All DBs
Position
2228418..2229302
Genome browser
AA seq
294 aa
AA seq
DB search
MDVSYRQMKAFVEVAKSSTFAEAAVNLHLTQPALSSAIKKMEEQLGGKLFKRNTRNVSLT
PEGEVLFPNALRLLHDWDNTFSDIQNLFAMAKGQLTICAMPSFAESHLPSILSAFHKRTP
NVNLRIVDVVMEQVIHEVTTGRSEIGFSFEPERKDGLVFKSLFADQFVVVANSSQAKYLS
NAPSWQDCLLHPLVMMNRGSAVRHWTQSQLARFGELNIIAETGQLSTLGKLIQNGLGISI
MPAICQSQMEGLGLVVRQITINPLIKNIGIIKHARKGLSLPAQSMWDLAIAHYA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtatcctaccgacaaatgaaagcgtttgtagaagtggcgaaatcttcgacattt
gctgaagctgcagttaatttacaccttactcagccagcactgtcttctgccattaagaaa
atggaagagcaattgggcggcaaactctttaagcgtaatacgcgtaatgtaagcctgaca
ccggaaggtgaagtgttattcccaaatgccttacgactgcttcacgattgggataacacg
ttttcagacatacagaacttgtttgccatggccaaaggtcagctgaccatttgcgcaatg
ccctcatttgcagagtcacatttacccagtattctatctgcttttcacaagagaacgcca
aacgtcaacttgcgtatcgtcgatgtagtgatggagcaagttattcacgaagtcactaca
ggtcgaagtgaaatagggttttccttcgagccagagcgaaaagatgggctagtgtttaaa
agtctgtttgctgaccagtttgttgtagtggctaattcttctcaggccaagtatttaagc
aacgcgccaagctggcaagactgcttgctgcaccctctggtaatgatgaacagaggctcc
gcggttcggcattggacacaatctcaattagcgcgttttggagaattgaacattattgcc
gaaacgggtcagctatcaacgcttggcaaattaattcaaaatgggttgggcatttcaatt
atgccggctatttgccaatctcaaatggaggggttagggctggtagtgagacaaataaca
atcaacccgttgataaaaaatatcggtattataaagcatgcgcgaaagggtttgtcgcta
cctgctcaatctatgtgggacttagctatcgcgcattacgcctaa
DBGET
integrated database retrieval system
