Alteromonas mediterranea DE: MADE_1010195
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Entry
MADE_1010195 CDS
T00747
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amc03400
]
MADE_1010195
Enzymes [BR:
amc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MADE_1010195
DNA repair and recombination proteins [BR:
amc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MADE_1010195
Prokaryotic type
MADE_1010195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEA98177
UniProt:
F2G297
LinkDB
All DBs
Position
complement(2285923..2287554)
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AA seq
543 aa
AA seq
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MLSDNTKPPITIIWLKRDLRLRDHEPLFRAVASNERILLLYCWEPSLIEEPHMSVRHWHF
IQQSIDDINGQLPEHVNVLTLHMEAVDALAFISRFYTINAVRSYQEIGLKVTYNRDLRVA
NHLNNRRIPFLEAKCGAVIRGLPHRAQWKANWEEYFAESTYDYDLKRANWVKWNVHVDIQ
KASLTLSEVSALYAAKKYINKDYLSKYCGVLSEDGLIDFSAMQPGGERRAWQVLKDFFND
RGQYYHQHISKPEYARRACSRLSPYLAWGNISIKQVYQSVQRQKHKKRALPIHEKKRWSR
ALSALTSRLHWHCHFIQKFESEHSIEWRPMNSAYENFPYIDGPEAERRFYHWSIGQTGYP
LVDACMRALRQTGYLNFRMRAMVTSFLCHHLNVHWIKAAHYLATQFLDFEPGIHYPQIQM
QASVTGIHTVRLYNPASQSKKLDPEGEFIKKWVPELGSLPSDAVHAPYSLLPLEAQMFDF
ALDRDYIAPIVDIAQHNRATAKRLWDYRERDDVIKEAKRIIHRHTMQNSPSRAWFKSKTT
QNH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcgacaacactaaaccgcctattacaataatatggttaaagcgagatcttcgc
ttgcgagaccatgaacccctttttcgtgctgtcgcatctaatgaacgtattctcttactt
tattgctgggaaccgtcattaatagaagaaccgcacatgagcgtgcgtcactggcacttt
attcagcaaagtatcgacgatataaatggtcaactgccagaacatgtcaacgtactaacg
ctgcatatggaggccgttgatgccctagcctttatttcacggttttacacgattaacgcg
gttagaagttaccaggaaataggtttaaaggttacgtataaccgtgacttacgggtcgct
aaccatttgaataataggcgcatcccctttttggaagcaaaatgtggcgcggtaataaga
ggattgcctcatcgagcgcagtggaaagctaactgggaggagtattttgctgaaagcacc
tatgattacgacctaaagcgtgcaaattgggttaaatggaatgtgcatgttgatatacaa
aaagcgtcgctaacactgagtgaggtttccgctttatatgcggcaaaaaaatatataaat
aaggattacctgtcaaaatactgtggcgttttatccgaagacggccttatagattttagc
gcaatgcagcccggtggcgaacggcgagcgtggcaagtacttaaggacttttttaatgat
cgcggtcagtactatcaccaacacatttctaagcccgagtacgcaaggcgtgcttgttct
cgtttgagcccataccttgcttggggcaatatctcgattaagcaagtgtatcaaagtgta
cagcgccaaaaacataagaaacgagcgttgccaatacacgagaaaaagcgctggagccgt
gccctgtccgcgttaacatcaaggttacactggcattgccactttattcaaaaatttgaa
agtgaacatagtattgaatggcgccctatgaacagcgcatatgaaaacttcccttacata
gacgggccggaagcagaacgtcgcttttaccactggagtattggtcaaacgggctatcct
ttggttgatgcctgcatgcgtgcacttaggcaaactgggtatctcaactttcgcatgcgt
gccatggtaacaagctttttatgccatcatttaaatgtacattggatcaaggctgcccac
tatcttgctacgcagtttttggactttgaaccaggtattcactaccctcaaattcaaatg
caagcaagcgtgaccggtattcacacggttcgcctatacaaccctgcgtctcagtctaaa
aagctagatccagagggtgagttcatcaaaaagtgggtacctgagcttggttcactgccc
agtgacgcggtacatgcgccttattcgctgttaccgcttgaagcgcaaatgttcgacttt
gccctcgaccgtgactatatcgcccctattgtggacatagctcaacacaaccgcgcgacc
gccaaacgcttgtgggattaccgggagcgagatgatgttataaaagaagcgaagcgcatc
atacatcgtcatacaatgcaaaatagccccagccgagcgtggtttaagtccaagacgact
caaaaccactag
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