Alteromonas mediterranea DE: MADE_1010210
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Entry
MADE_1010210 CDS
T00747
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amc03400
]
MADE_1010210
Enzymes [BR:
amc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MADE_1010210
DNA repair and recombination proteins [BR:
amc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MADE_1010210
Prokaryotic type
MADE_1010210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEA98180
UniProt:
F2G2A0
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All DBs
Position
2288985..2290409
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AA seq
474 aa
AA seq
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MTIPVSIMWFRQDLRVKDNPALNAACDMGKIVPIYIFDESAPDGRMPGGASKWWLHHSLK
SLNKRLNGHLQIFKGDPQTLIPKLMESFNASSIFWNRCYEPWQINRDKAIKKSLLGSDYE
AHSFNGSSLWEPMKVLKKDGTPYRVFTPYYKNGCLQIEEPRYPKAPPARITYADVDDNSD
GLAALALLPTIKWDDTIAKEWTPGEDGAADNLSDFIENSARRYKDGRDIPSAKGTSRLSP
HLHFGEVSPNQVWYAIKDRFGTSEDKSIETYLSELGWREFSYYLLFHFPTLPNKNFNDKF
DKFPWRTDAKALKAWQTGNTGIPIVDAGMRELWQTGYMHNRVRMIVGSFLVKNLLLSWHE
GERWFWDTLLDADLASNSASWQWVAGSGADAAPYFRIFNPILQGEKFDKKGGYVRQYCPE
LNGLSDKYIHKPWEAPSAILKEAGVELGKDYPKPIVDLKASRQRALDAFQTLKE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgaccattcctgtaagcattatgtggtttagacaagaccttcgcgtaaaagacaaccct
gcattgaatgcagcgtgtgacatgggaaaaatcgttcccatctacatatttgatgaaagt
gcgccagatggcagaatgcctggcggtgcaagcaagtggtggcttcaccattcgttaaaa
tctttaaacaaacggctgaacggtcatctacaaatttttaaaggcgatccacaaactctc
attccaaagcttatggagtcctttaatgcatcgtctatcttttggaaccggtgttacgag
ccatggcaaattaaccgtgacaaagccattaaaaagtcacttctaggtagtgactacgag
gcgcatagctttaacggtagttcattgtgggagccaatgaaggtactcaaaaaagatggc
acgccttatcgagtttttaccccttactacaaaaatggctgtctacagattgaagagcca
cgctacccgaaggcacctccagcacgtattacctatgcagatgttgacgataacagcgat
ggcttagccgcgttagcgttgcttccgaccataaaatgggatgacaccattgccaaggag
tggacgcctggcgaagatggcgcggcagataatctgtctgactttattgaaaactcagca
cgaaggtataaagacggcagagacattccttcggcgaaaggaacttcacgactgtcaccg
catttacattttggcgaagtgtcaccaaaccaagtttggtatgccataaaagataggttc
gggactagcgaagacaaaagtatcgagacttatctcagtgaacttggttggcgagaattc
agctattaccttctgtttcactttcctacgctaccgaataaaaacttcaacgataagttt
gataaatttccatggcgtactgacgcaaaagcgctaaaagcgtggcaaaccggtaataca
ggaattcctattgttgatgcgggtatgcgtgaactgtggcaaacaggctacatgcacaac
cgcgttcgcatgattgtggggtcatttttagtcaaaaatttgttattgagctggcatgaa
ggtgaacgctggttttgggataccttacttgatgccgacttagccagtaatagcgctagt
tggcaatgggtagcaggctcaggggcagatgccgcaccgtacttcagaatttttaatccc
atcctccaaggtgaaaagtttgataagaaaggcggctatgttcgtcaatattgccccgaa
ctaaatggactgtctgataaatacatccacaagccctgggaagcaccatctgctatattg
aaagaggcgggtgttgagcttggtaaggattaccctaagcctattgttgatttaaaggca
tcacgccagcgagcactagacgcgtttcaaacattaaaagagtag
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