Alteromonas mediterranea DE: MADE_1012345
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Entry
MADE_1012345 CDS
T00747
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amc03009
]
MADE_1012345 (rluD)
Enzymes [BR:
amc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
MADE_1012345 (rluD)
Ribosome biogenesis [BR:
amc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MADE_1012345 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
AEA98605
UniProt:
F2G6X1
LinkDB
All DBs
Position
complement(2854429..2855412)
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AA seq
327 aa
AA seq
DB search
MTQSPNTIQLEASTEAAHFGLRLDQVLADLFPEYSRSKLKTWIQDGNVAVNGEVITVPRH
KMQMDELVTVQAEMDVQVTSEAQDIALNIVYEDEHILVINKPADLVVHPGAGNPSGTVLN
ALLNHCPEIDKVPRAGIVHRLDKDTTGLMVVAKTIPAQTHLVDQLQRREMSREYEAVALG
TMVAGGIVDAPIGRHATKRTHMAVREMGKPAVTHFRVIEKFRAYTHLRLKLETGRTHQIR
VHMAHIKHPLLGDQVYGGRPRLPKGASEEFIAALRGFQRQALHAAQLSLFHPETEEWMTW
KAPLPQDMQDLLKAVKKDTADNPQDML
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacacagtcgccgaacacaatacaattagaagcttcaacggaagctgcgcattttggt
ttacggttagatcaggttttggctgatttgttccctgaatattctcgttctaagttaaaa
acttggatccaagatgggaatgttgctgtaaacggtgaagtaatcaccgtgcctcgccac
aaaatgcaaatggatgaacttgttactgtacaggccgaaatggatgtacaagtaacgagc
gaagcgcaagacatcgcgttaaacattgtttatgaagatgaacacatcctagtcataaac
aaacctgcagatttggttgtgcatccaggtgcaggaaacccaagcggtaccgtgctaaat
gccttgttaaatcattgtccagagatagacaaagttccacgtgcgggcattgtccatcgc
cttgacaaagacacgacggggttaatggtagtagcaaaaacaattcctgctcaaacgcat
cttgttgaccaacttcaacgtcgggaaatgagtcgtgaatacgaagccgttgccttaggt
acgatggtcgctggtggtattgtagatgcgcctattggtagacacgcaacaaaacgtacg
catatggcagtacgtgaaatgggcaaaccagcggtcactcattttcgtgttatcgaaaaa
tttcgcgcatacacgcacctgcgtttgaagcttgaaactggccgtacgcaccaaatccgc
gtacacatggcccacattaagcatcctttgcttggcgaccaagtttatggcgggcgtcct
cgtcttcctaaaggggcgtcagaagaatttatcgctgcgcttcgcggattccaacgtcag
gcgttgcacgccgcacagctctcgctgtttcaccctgaaactgaagagtggatgacgtgg
aaagctcccctacctcaagatatgcaggacttgcttaaagccgtgaaaaaggacaccgcg
gacaatccacaagatatgctttaa
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