Alteromonas mediterranea DE: MADE_1013650
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Entry
MADE_1013650 CDS
T00747
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc00061
Fatty acid biosynthesis
amc00071
Fatty acid degradation
amc01100
Metabolic pathways
amc01212
Fatty acid metabolism
amc02024
Quorum sensing
amc04146
Peroxisome
Module
amc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MADE_1013650
00071 Fatty acid degradation
MADE_1013650
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MADE_1013650
09145 Cellular community - prokaryotes
02024 Quorum sensing
MADE_1013650
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amc01004
]
MADE_1013650
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amc04147
]
MADE_1013650
Enzymes [BR:
amc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MADE_1013650
Lipid biosynthesis proteins [BR:
amc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MADE_1013650
Exosome [BR:
amc04147
]
Exosomal proteins
Exosomal proteins of breast milk
MADE_1013650
Exosomal proteins of breast cancer cells
MADE_1013650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Tox-PAAR-like
Motif
Other DBs
NCBI-ProteinID:
AEA98864
UniProt:
F2G9P4
LinkDB
All DBs
Position
complement(2574262..2575941)
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AA seq
559 aa
AA seq
DB search
MPLDMTANANTTEVITSPLSMLYHWEQNRGNDVFLTQPIKGEYHDYTWKQVAEQARKVAA
RLREFNFPQGSRIGIFSKNCAEWFITDLGIMMAGHVSVPIFSTAGPDTVQYVLKHADVQL
LFVGKLDNTAEQVASIPTEYLTVAFPYPNIATKQQWAEFMDIAPIKDSPVPDMDDIMTII
YTSGSTGQPKGVVHSYNTACWAARRSLDQLGINENDRTMSYLPLAHITERVLVELSSYYS
GGKIHFVEDLATFQRDVGHCQPTLFISVPRLWTKFQMGVLAKMPQKKLDTLLKIPILNKI
VAKKIRNGLGINNARLWASGSAPLAPAVIEWFAKIGINISEGWGMTENSAYGTGSVPFRH
DKIGCIGKPYDGVDIRTSEEGEIQVKSPCNMLEYYLEPEKTAEVFTEDGYLRTGDKGVID
ADGYVKITGRLKDIFKTAKGKYVTPAPIEAKFMENPIVEQVCVTGTNLPQPVALLVLSEE
AHKKDKASIESSLKKTFDAINAKLESHQVMDRVVVMKKEWSIENDLLTPTLKVKRHVLEE
RFEGIIQGDYSEKLVWVNA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgccgctagacatgacagcaaacgcaaataccacggaagtaataacatcgccattaagt
atgttgtaccactgggaacagaaccgtgggaacgatgtattccttacccagcctattaaa
ggtgaatatcacgattacacgtggaagcaagtcgccgaacaagccagaaaggtagcggcc
cgcctgcgtgaattcaattttccacaaggtagccgaattggaattttttcaaaaaactgc
gccgaatggtttattaccgacctaggcataatgatggcaggtcatgtctcggtgcctatt
ttctctacggcggggccagacactgttcaatacgtattaaagcacgctgatgtacagtta
ctttttgtgggcaagctagataataccgcggagcaggtagcgtctattccaactgaatac
ctaacggtggcgtttccttaccccaacattgctaccaagcaacaatgggctgagtttatg
gatattgcgcctattaaagattcgcctgtaccagatatggacgacatcatgaccattatc
tatacatcaggtagtacaggtcagccaaaaggcgtagtacacagctacaatactgcttgt
tgggctgctcgccgctcgttggaccagctcggcattaatgaaaacgaccgtacaatgagt
tacttgcctctggcgcatatcacggaacgagtgcttgtagagctttccagctattacagc
ggtggaaagattcactttgtcgaagacctggctacatttcagcgagatgtggggcattgt
cagccaacactatttatttctgttccccgtttatggacgaagttccaaatgggcgtgcta
gcgaaaatgccgcaaaagaaactcgataccttgttgaaaattccaattctcaacaaaatt
gtagcgaaaaaaattcgcaatggtttaggcataaacaacgcgcgtttgtgggccagtggt
tctgcaccgttagcgcctgccgtaatcgagtggtttgctaaaataggtattaatatttct
gaagggtggggcatgaccgaaaacagtgcttatggcacaggtagtgttccgttccgccac
gataaaataggttgcattgggaagccttatgatggcgtagatatccgaacgtctgaagag
ggtgagatacaggttaagtcgccatgtaatatgctggaatattacttagagccggaaaaa
accgctgaagtgtttaccgaagatgggtacttgcgtactggcgataaaggggtgatcgac
gctgatggttacgtaaaaatcacaggccgcttaaaagacatcttcaaaacggctaaaggc
aagtacgtgacgccagcgccaattgaagcgaagtttatggaaaaccctatcgtagagcag
gtatgtgtaacaggtacaaaccttcctcaacctgtggctctgctagtgcttagcgaagag
gcgcacaagaaagataaggcaagcattgaatcgagccttaagaaaacctttgatgccata
aatgctaagttggaaagccatcaagtgatggatcgtgttgtggtcatgaaaaaagagtgg
agtattgaaaacgacttacttacacccacgttgaaagtgaaacgacacgttttagaagag
cgtttcgaaggtattattcaaggcgattactccgaaaaacttgtgtgggtaaacgcgtag
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