Alteromonas mediterranea DE: MADE_1016050
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Entry
MADE_1016050 CDS
T00747
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MADE_1016050
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amc01007
]
MADE_1016050
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amc03016
]
MADE_1016050
Enzymes [BR:
amc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
MADE_1016050
Amino acid related enzymes [BR:
amc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
MADE_1016050
Transfer RNA biogenesis [BR:
amc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
MADE_1016050
Prokaryotic type
MADE_1016050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
AEA99340
UniProt:
F2G2N9
LinkDB
All DBs
Position
complement(3551852..3554626)
Genome browser
AA seq
924 aa
AA seq
DB search
MDKTFEPQSIEQQCYKSWEEAGLFKASGSGDPYCILLPPPNVTGSLHMGHGFQQTIMDAL
TRYHRMKGDNTLWQVGTDHAGIATQMVVERQLNAEGKTRHDLGREDFIKKVWEWKEHSGG
TITGQMRRLGTSPDWSREVFTMDEDLSKAVTEVFVKLHEEGLIYRGKRLVNWDPVLHTAV
SDLEVLNEEEDGHMWHMRYPLADGSGELVVATTRPETMLGDTAVAVHPDDERYQRFIGKE
IKLPITGRLIPVIADDYVDQEFGTGCVKITPAHDFNDYDMGKRHNLPMINILTDDAKIND
DAPEAYRGLDRFDARKQIVADLEAQGSLVKIEPHELKVPRGDRTGAVIEPYLTDQWYVAV
ESLAKPAIEAVESGEIRFVPENWNKTYYQWMHNIQDWCISRQLWWGHRIPAWYDENGKVF
VGRTEEEVREKHGLGSEVTLSQDDDVLDTWFSSALWPFATMGWPEETPDLETFVPSSVLV
TGFDIIFFWVARMIMMTKKFTGKIPFKDIYITGLIRDENGDKMSKSKGNVLDPIDLIDGI
DIESLVTKRTAGMMQPQLAEKIAKRTRKQFPDGIQAYGTDALRFTFAAMASTSRDINFDM
ARVEGYRNFCNKIWNASRFVLMNTEEHDTGRDGGEMVLSMADRWIWAKFQQTLVEFEKAL
EDYRFDIAAQTVYEFTWNQFCDWYLELTKPVLSNDASTDAEKRGTRHTLINVLESLLRLL
HPLMPFITDTIWQRVVPQSALKVEEGASIMVQAFPEVDAAKQDDKVLADIEWVKKFIVGI
RNIRGEMDISPNKPLNALLKNVSDEDARRLDAAKAFLDKLSKLETVTILKDGEEAPASAT
ALVGEMEILIPMAGLIDKDAELARITKAMEKIEKDVSRTRGKLGNEKFVSNAPEAVIEKE
RGKLEEGEKALAKLKEQFDTIKAL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaccttcgaaccgcagtccatcgagcagcaatgctacaagtcatgggaagag
gcgggtttatttaaagcttcaggtagcggcgacccttattgtattttgcttccgccacca
aacgttaccggtagccttcacatgggccatggtttccagcaaaccattatggacgcctta
acccgttatcaccgcatgaagggcgacaatacgctatggcaagtgggtactgaccacgcc
ggtattgctacccagatggtggtagaacgccaacttaacgctgaaggcaagacgcgccac
gatttaggtcgcgaagacttcatcaagaaagtgtgggaatggaaagagcacagcggcgga
acgatcaccggtcaaatgcgccgtttaggtacgtcacctgactggtctcgcgaagtgttc
accatggacgaagacctgtctaaagccgtaacggaagtgttcgttaaactacacgaagaa
ggccttatttaccgtggcaagcgtttggttaactgggatccagtgcttcacacagcagta
tctgatcttgaagtactaaacgaagaagaagacggccacatgtggcacatgcgctacccg
ttagctgacggtagcggtgagctagtggtagccactacccgccctgaaaccatgctaggt
gatacagcggttgcggttcaccccgatgacgagcgttatcaacgctttatcggcaaagaa
attaagctgccgattactggccgtttaattcctgtgattgccgatgactatgtcgaccaa
gaattcggtacaggctgcgttaaaattacgccagctcacgactttaacgactacgacatg
ggtaagcgtcacaacctacctatgatcaacattcttaccgacgatgcgaaaattaacgat
gatgcgccagaagcgtatcgcggtttagatcgcttcgatgcgcgtaagcaaattgttgct
gacctagaagcccaaggctcgttggttaagattgagccgcacgagcttaaagtgccgcgt
ggcgacagaaccggagcggttatcgagccataccttactgaccagtggtatgtagccgtt
gagtctcttgctaagccagctattgaagcagtggaaagcggtgaaattcgttttgtgcca
gagaactggaacaaaacttattaccagtggatgcacaacattcaagactggtgtatttca
cgtcaactgtggtggggacaccgtattccggcgtggtatgacgaaaacggcaaggttttt
gttggccgcaccgaagaagaagtacgtgaaaagcacggccttggcagtgaggtaaccctt
tcacaagacgacgatgtactcgatacctggttctcaagtgcactatggccgttcgcgacc
atgggctggccagaagaaacgccagatctagaaaccttcgtaccgtcttcagtgctagta
actggctttgacatcatcttcttctgggttgccagaatgatcatgatgaccaagaagttc
accggcaaaattccgtttaaagatatctacatcactggtcttattcgcgatgagaacggc
gataaaatgtcaaagtcaaagggcaacgtgcttgaccccatcgatttgattgatggtatt
gatattgagtcgctagtcactaagcgtaccgcaggcatgatgcagccgcagctggctgaa
aagattgccaagcgcacgcgtaagcagttccctgacggtattcaggcttacggtacagac
gcacttcgctttacctttgctgctatggcgtcaaccagccgcgacatcaactttgatatg
gcccgtgttgaaggctaccgcaacttctgtaacaaaatttggaatgcatcgcgtttcgta
ttgatgaacacagaagagcacgacacaggtcgtgacggtggcgaaatggtacttagcatg
gccgatcgctggatttgggcgaagttccaacaaaccctggttgagtttgaaaaggccctt
gaagactaccgcttcgacattgctgcgcaaacggtttacgagttcacctggaaccagttc
tgcgactggtacttagagctgactaagcctgtgcttagcaacgatgccagcaccgacgct
gaaaagcgcggtacacgccatacgcttatcaatgtgcttgaaagcctgcttcgcttgttg
cacccgctaatgccatttatcaccgacactatttggcagcgcgttgtgccacaaagtgcg
cttaaggtggaagagggcgccagcattatggttcaggcattccctgaggttgatgcagca
aaacaagacgacaaagtacttgctgatatcgagtgggtgaagaagtttatcgtgggtatt
cgtaatatccgcggtgaaatggacatttcgccaaacaaaccgcttaacgcgctacttaaa
aacgtaagcgatgaagacgcgcgtcgtcttgatgcggctaaagcgttcctcgataagctt
tctaagcttgaaaccgtaactatattgaaagacggtgaagaagcaccagccagcgccaca
gcgcttgtgggcgagatggaaattcttatcccaatggcagggcttatcgataaagacgca
gagcttgctcgtattactaaggccatggagaaaatcgagaaagatgtttctcgtactcgt
ggcaaattaggtaacgagaagttcgtaagtaatgcaccagaagcggttattgaaaaagaa
cgcggtaagttagaagagggcgaaaaagccctagccaaacttaaagagcagttcgacacc
ataaaagcgctgtaa
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