Alteromonas mediterranea DE: MADE_1016385
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Entry
MADE_1016385 CDS
T00747
Name
(GenBank) transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amc03000
]
MADE_1016385
Transcription factors [BR:
amc03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
MADE_1016385
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_23
SH3-B_UBE2O
Motif
Other DBs
NCBI-ProteinID:
AEA99403
UniProt:
F2G3K6
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All DBs
Position
3628362..3629039
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AA seq
225 aa
AA seq
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MSHHAFVLTRNSYGENTRRDEAYERFLSILPSCGFSVTSGAIHPPRSVLNNTYTFFIDAQ
YCDSVAMLNLPVVNDYPDLNKVIFNVPQADVDFHYAALQHGINGIFHIEDNLELLVRGVQ
QVQAGNKWYSREIMSRYIDANLVPKTKPVAALQSSTTVLTKRELAITRKIADGAQNQEIA
DCLHISVNTVKTHVYSIFRKTDCRNRVELIKWFDHQFSQPQQVSY
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatcacgcgttcgtactaacaagaaacagttacggcgaaaatacaagaagggac
gaagcttatgaacgattccttagtattttaccgtcgtgtggattcagcgttaccagtggt
gctatacacccaccacgtagcgttttaaacaatacctataccttctttatagatgcccag
tattgcgactcagtcgccatgctcaacttgcccgttgttaatgattatcccgatttgaac
aaagttattttcaatgttccacaagccgatgttgattttcattacgctgcgcttcagcat
ggaataaacggcattttccatatagaagacaatttggaattactcgttcgcggggttcag
caagtgcaagcaggcaacaaatggtatagccgggagattatgagccgctatattgatgcc
aatttagtgccaaaaactaagccggttgctgcgcttcaatcgtcaactacagtcctaacc
aaacgagaactagccattacgcgcaaaattgcagatggcgcgcaaaatcaagagattgcg
gattgtttacacatcagcgtcaatacggtgaaaactcatgtgtacagtattttcaggaaa
actgactgccgcaaccgcgtagagctcattaagtggttcgatcatcagtttagtcagcct
cagcaagtaagttattaa
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