KEGG   Alteromonas mediterranea DE: MADE_1016855
Entry
MADE_1016855      CDS       T00747                                 
Name
(GenBank) pirin
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
amc  Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:amc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amc03000]
    MADE_1016855
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:amc02048]
    MADE_1016855
Transcription factors [BR:amc03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    MADE_1016855
Prokaryotic defense system [BR:amc02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    MADE_1016855
SSDB
Motif
Pfam: HTH_3 Peptidase_M78 HTH_26 HTH_24 HTH_19 HTH_31 MarR_2 Sigma70_r4 Sigma70_r4_2 YdaS_toxin HTH_37 AraA_central
Other DBs
NCBI-ProteinID: AEA99495
UniProt: F2G4I5
LinkDB
Position
complement(3735372..3736487)
AA seq 371 aa
MTNQHSEFNPDYSYHPGIFLEEELEVKGMTQAELAKRSGITAKTINSIIKGSASISSETA
VILECVLGKSASYWLGLDSQYQIHKAKGENDELLSKEISFLDELDLKCLIKERWIEQFTD
RLEQLKELYRFFGVASKKQIPQVWSQLEVSYRTSEKFQQSHLHILAWLRRGELLAHQIKC
SPFDAKKFKDALLNCRKLTVEEFSDMRIKLQEICAEAGVAVVCVPEIKKVSTSGAARWLD
KNKAMIQLSLRGKRDDKFWFNFYHEAGHILLHGRKEQFIDNNGKANPLSEDSYHTEENRF
KEKEADEFAANYLIPRKDFSLFVSNSDFSESSICQFAKTQGIAPGIVVGQLQSRGYLDWS
QLNNLKKKYDF
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgacaaatcaacacagtgagttcaatccagactattcataccatccaggtatatttctg
gaagaagagcttgaggtgaaaggaatgactcaagctgagcttgcgaaaagatctggtatt
acagcgaaaacgattaattcgattattaagggaagtgcctcaatatcttcggaaacagcc
gttattttagagtgtgtattagggaaatcggcatcctattggctcggactggattctcaa
tatcaaattcataaagcaaaaggcgagaatgatgaacttctcagtaaagagattagcttt
ttggatgaattagatctgaagtgtttaataaaagagcgatggatagagcaatttactgac
aggctagagcaattgaaagaattgtatcggttttttggtgtggcaagtaaaaagcaaatt
cctcaagtttggtctcagttagaagtaagttacagaacgtctgaaaagtttcaacaaagc
catttacatatattggcttggttacgtagaggtgagcttttagcacaccagattaaatgt
tctccgtttgatgcaaagaaatttaaagatgccctattaaactgccgcaagcttaccgtt
gaagaattttccgatatgagaataaagctgcaagaaatctgcgcagaagctggtgttgca
gttgtctgcgtgcctgagattaagaaagtatctacaagtggagctgctcggtggttggat
aaaaataaggcaatgattcaactgagtctaagaggtaaacgcgatgataagttttggttc
aatttttatcatgaagctggtcacattcttttgcatggaagaaaagaacagtttatcgac
aataatggcaaagcaaatcccttgagtgaggatagttatcatactgaagaaaataggttt
aaggaaaaagaggcggatgaattcgctgcaaattatcttatacccagaaaggatttctca
ttatttgtctctaactctgattttagtgaaagtagtatctgtcaatttgctaaaactcaa
ggaatagctccaggtattgttgtcggtcaacttcagagccgaggttacttagattggagc
cagcttaataatttgaaaaagaaatacgacttttaa

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