Alteromonas mediterranea DE: MADE_1019690
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Entry
MADE_1019690 CDS
T00747
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc03030
DNA replication
amc03430
Mismatch repair
amc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MADE_1019690
03430 Mismatch repair
MADE_1019690
03440 Homologous recombination
MADE_1019690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amc03032
]
MADE_1019690
03400 DNA repair and recombination proteins [BR:
amc03400
]
MADE_1019690
Enzymes [BR:
amc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MADE_1019690
DNA replication proteins [BR:
amc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MADE_1019690
DNA repair and recombination proteins [BR:
amc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MADE_1019690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FAN1_HTH
VRR_NUC
Rv2179c-like
RNase_H_2
RraB
Motif
Other DBs
NCBI-ProteinID:
AEB00061
UniProt:
F2GAU6
LinkDB
All DBs
Position
complement(4300168..4302315)
Genome browser
AA seq
715 aa
AA seq
DB search
MRKDLPPRYYLTHFHEFLAFFEGASQSLLSSEAVRFIQRFKALDEDKQCIVVRAANRKYA
VIDRMQFNYGEIVAPQHQIDCLIKDGWFGDLTHATLNDIAGVLTKDALLALLSEYGSIQG
LASQRKPKLVNLLSEQITARGWPESFSLESYLVCLFDSALRFLLFIYFGNTKSRLNQFSM
RDLGVMRTRSDSVTDTARFESKDDALAAWFYANHSSQLAFYNHETLLSLADSEFPETEGV
SASFYRDQLLYALGLKVLEVNRDKGLNILALAQSDKAKEKWLRESYKDGNDGEVRRALEH
IIDNPQSDTLLAFAEDFYARKYHKKRTSTVTDMLRNASRTLAIDVSQNQQVERGVLAHYA
RQGVQGWRTENRLWRSLFGLTFWKQLYEEDTLVTEFDRRPLSLKQNNFYAKFEDSIETLL
DALDSKEKLRFHIHKMATQHYGKVNSLFMWSSHLLTPIEALIEHGSLSAIYALLRMMSKD
FESLRDGFPDIMVLDDSLRFEEIKAPGDQLRRNQLVSIQRLQQAGFDVAVTTVNWVRDPA
QPYVVVDIETTGGNNSYNRITEIGMVKLVGGKEVDRFQTLLNPQRRIPSSITRLTGISDD
MVADAPLFAEVADHIASFTEDAVFVAHNVNFDYGFIKQEFARLEQSFRRPKMCTVREMRR
THPGLSSYSLANLTKHFHIDMEQHHRALSDAKAAAELLKLAFEKDDEGFSVGDNV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagatttaccgccccgttattacctgacacattttcatgaatttctcgcgttc
tttgaaggggcgagccagtcgttattaagcagtgaagctgtgcgctttatccagcgtttc
aaagcccttgatgaggacaagcagtgtattgtggttcgcgcggctaatcgcaaatatgca
gtgatagatagaatgcagttcaattatggtgaaattgttgcccctcaacatcaaattgac
tgtttaattaaggacggctggtttggcgatttaactcacgctacgcttaatgacattgct
ggggttttgacaaaagatgccctgctcgcgcttttgtcagaatacggcagcattcaaggt
cttgcttctcagagaaaacctaaactcgtcaacttactgagtgagcaaattactgcccga
ggatggccagaaagtttttcacttgaaagctacttagtgtgtttattcgatagtgccctg
cgcttcttattgtttatttattttggtaacacaaaaagccgtttaaatcagttttctatg
cgcgaccttggggtaatgagaacacgctctgattctgttaccgacaccgcgcgctttgaa
agtaaagacgatgcactggccgcgtggttttatgccaatcattcaagccagcttgccttc
tataaccatgagacattgttatcgcttgcagatagcgaattcccagaaacagaaggggtg
tcagccagtttttatcgcgaccagctactttacgcactagggcttaaagtacttgaggtt
aaccgcgataaggggcttaacatactggcattagcgcaaagcgataaagcaaaagaaaag
tggctaagagaaagctataaagacggtaacgacggtgaagttcgacgcgctttagagcac
atcatagataatccccagtcagataccttgctggcttttgcggaagacttttatgcccgc
aaatatcataaaaagcgcaccagcaccgttaccgacatgctgagaaacgcaagtagaacc
ttagccatagatgttagtcaaaatcagcaggtagagcggggagtgctggcgcattatgcc
agacagggagttcaagggtggcgaacagagaaccgtttatggcgcagtttgtttggcctc
actttttggaagcagctttatgaagaagatactctggtcacggaatttgatagaaggccg
ctgtcgctgaagcaaaataatttttatgcaaagtttgaagatagcatcgagactttactc
gatgcgcttgatagcaaagaaaagctgcgctttcacatacataaaatggcgacccaacac
tacggtaaagtaaacagcttatttatgtggtcgagccatttgctgactcctattgaggcg
cttatagagcacggttcgctgagtgcgatatacgcattacttcgcatgatgagcaaagac
tttgaaagcctgcgagacggttttcccgatattatggtattggatgattcgcttcgcttt
gaagaaataaaggcgccgggcgatcaactgcgccggaaccaattggtttctattcagcgt
ctacagcaagccggattcgacgtggctgttaccacggtaaattgggttcgcgacccagcg
cagccctatgttgtggtagacattgaaactacgggcgggaataacagctataaccgtatt
actgaaataggcatggttaagctagttgggggaaaagaggtagataggtttcaaacctta
ctcaacccacagcgacgaataccaagtagtatcacgcgtcttacgggtatctctgacgat
atggttgccgatgcaccgcttttcgcagaagtagccgatcatatcgccagctttaccgaa
gatgctgtgtttgtcgcgcataacgtaaattttgactatgggtttattaaacaggaattt
gcgagattagagcagtcgttcaggcggcctaaaatgtgtactgtgcgggagatgcgccgc
acccacccggggttatcttcttattcattggcaaacctgactaagcattttcatatcgac
atggagcaacatcaccgcgcgctaagcgacgctaaagcggctgcagagcttcttaagcta
gcatttgagaaagatgatgaaggcttcagtgttggtgataatgtttag
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