Alteromonas mediterranea DE: MADE_1020330
Help
Entry
MADE_1020330 CDS
T00747
Name
(GenBank) DEAD/DEAH box helicase
Organism
amc
Alteromonas mediterranea DE
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
AEB00189
UniProt:
F2G479
LinkDB
All DBs
Position
complement(4435544..4438801)
Genome browser
AA seq
1085 aa
AA seq
DB search
MTLSQEHLLQVDQHWAVQSISAELRDTAMEMAERRLVDVALGNLLEYAETEFDSDLLEQV
ATAYELAAIEGIGALLHPVANQDNKNIRELAQAGAFRAFGLYRVLPVPSDNEARLFHVLH
VSGLAYCADRWTDLRRWFEEQNSTVAVPSVADVTWDKRLLYRIFDCWLRLLRKNRWDDLD
QISEIVLGLRNDQANYEKALLEQTQGAEAQSVAMRLVALYHWAKATERLAVYMLQGEPVA
IDAQLDQHFEAAQKAAQASKDPQLEMILRWLHVASRKMVAGSLWWVAHTVNSRVTRFVSH
VTKHKSLFELLPPQRAALQEQGLLDQASRAVIVDLPTSGGKTALAQFRMLQALNQFDQDD
GWVAYVAPTRALVSQITRRLREDFGPLGIQVEPLTGAIEVDAFEEALLGEARAFQVLVAT
PEKLQLVMRNKKVARPLALVVMDEAHNIEDESRGLRIELLLATIKQESPRANFLLLMPFV
PNANDLAQWLAADRGRSISLGTSAWQPNERIVGLFDIHKGEKRGDWNLSFETLTTTQRTI
HLKGIHNVDGNRPLQKLTYSSAKGLATQAVAMAKVFSKRGTSIAVAQTIPDAWSIARKVA
AELEPFEQAHEDIKLVQRFLAAEISEDFELIDMLSKGVVVHHAGLPAEALSLIEWLTEAG
RIRVMCATTTIAQGLNFPVSSVFLATRKLPSSKPPYDNEMSHRAFWNLAGRAGRIGHDSV
GVIGIAAGKEPNEVRKYVSDATASLVSRLEGMLDDLQTAGKLADLSWVMQQEQWADFRSY
IAHLWNEKRNLDAVIGEAEQLLRNTYGFGSLRAKADKASQEKADALLEATKGYVRKLAEH
PENASLADVTGFSPEGVRSTLLDLNNLENKLTLADWEPSSLFGDKSKSVLPSLMGIMLRV
PQLQESLREISKGQGNSHRKLADITQAWVTGSSIESIAKTYFEGDSLTDQISKACRAVYR
DLANNGAWGLSALSKMPTSGLDFEAMTDEEKRRLNNLPAMLYHGVKTEEGVLMRMNNVPR
SIAERAGEDFKARTEAGAENTLSPRKASEYLKSLKPDDWARLKPDNSSLSGEDYLKVWKR
LSGEA
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgacgctttcacaagagcacttactacaggtagatcagcattgggctgttcagtccatt
agcgctgaattgcgtgatacggctatggaaatggcggaacgacgcttggttgatgtggcg
ctgggtaatctacttgaatatgcggaaactgagtttgacagtgacttgttagagcaagta
gcaacggcgtatgagttagccgcgatcgaaggcattggcgctttgttgcaccctgttgcc
aatcaggacaataaaaatattcgagagcttgcacaagctggcgcgtttcgagcgttcggg
ctttatcgtgtattacccgtaccgagtgacaatgaggcgcgcttgtttcatgttttgcat
gtgtcgggtttggcctactgcgccgatcgctggaccgatttacgtcgatggtttgaagag
cagaacagtacagtagcagtacccagtgtggctgatgttacttgggataagcgtctgcta
taccgaatttttgattgttggttgcgactgcttcgcaaaaaccgctgggatgacttagat
cagatttcagagattgtgcttggcttacgaaacgatcaagcaaactacgaaaaagcgtta
ctagaacaaacccaaggtgcagaggcgcaaagcgtcgccatgcgtttagtggcgctttat
cattgggccaaagcaacagagcgtttagctgtgtacatgctgcaaggcgaaccggtagcg
atagatgcgcaattagatcagcattttgaagcggcgcaaaaagcggcacaagcctctaaa
gacccgcagctcgaaatgattttacgctggttacatgtcgcaagccgaaaaatggttgct
gggtctttatggtgggtggcgcatacggttaactcccgtgtgacacgctttgtttcccat
gtgactaaacacaagagcttatttgaactgttaccgccgcaacgagcggcactgcaagag
caaggtttactcgaccaagctagcagagcggtaattgttgatttgcctacatccggtggt
aaaacagcgctggcacagttccgcatgttgcaagcgctgaatcagtttgatcaggatgat
ggttgggtggcctatgttgcgccaactcgcgctttggtttcgcaaattacccgacgatta
cgtgaagattttggcccattaggtattcaagttgagccgttaactggcgcgattgaagtc
gatgcttttgaagaagcgcttttgggtgaagcacgtgcttttcaggttttggttgcaaca
cctgagaaacttcaattggtgatgagaaacaaaaaagttgctcgcccattggctctggtt
gtgatggatgaagctcacaatattgaagatgagtctcgtggcttacgcattgaacttctg
cttgcaacgattaagcaagaatcacctcgggcaaacttcttactattgatgccatttgtt
ccgaatgctaacgatttagctcaatggctcgctgctgatcgtggccgaagcatcagcttg
ggcacctctgcttggcaaccgaatgagagaattgttggtctatttgatattcataaaggt
gaaaaacgtggtgattggaatttaagttttgaaacgttgacgaccactcaacgtacgatt
caccttaaaggaatccacaatgtagatggtaaccgccctctgcaaaaactgacgtactct
agcgctaaagggctcgcaacacaggctgttgctatggctaaagtgttttctaagcgcggt
accagtattgctgtagcgcagacgattccagatgcttggagtattgctcgtaaagttgcc
gcagagcttgaaccttttgagcaggcgcacgaagacattaaactggttcaacgttttctt
gcggctgagattagtgaggactttgagctaattgatatgctgtcaaaaggtgttgttgtg
catcatgcaggcttacccgctgaggcgctttcattaatcgagtggctgacagaagctggc
cgtattcgagtgatgtgtgcaacgacaaccattgcacaagggcttaacttccctgtttca
tctgtttttcttgcgacgagaaaattgccgtctagcaaaccaccttatgataatgaaatg
tcacatcgggcattttggaacctcgcggggcgagctgggcgtatcggccatgatagcgta
ggcgtaatcggtattgctgcgggcaaagagccgaatgaggtaagaaagtatgttagtgat
gcaaccgcatcgttagtttcccgtttggaagggatgctggatgatcttcaaactgcgggg
aaattagcagacttatcttgggttatgcagcaagaacaatgggcagacttcagaagctat
atcgctcatttatggaatgaaaaacgtaacttggacgctgtaattggtgaagcagaacaa
ttactgcgaaatacctacgggtttggttctcttcgcgctaaagctgataaagcctcgcaa
gagaaagctgatgcgcttcttgaggctaccaaaggatatgttagaaagttagctgagcat
ccagaaaatgcttctcttgctgatgttacaggcttctctcctgagggtgttcgttcaact
ttattggatttgaataaccttgaaaacaagttaacgcttgcagattgggagccttcgagt
ctatttggcgataaatcgaagtctgtgctgccaagcttgatggggattatgctgcgggtt
ccgcagttacaagaaagtttacgagagatcagtaaaggacaagggaatagtcatcgtaaa
cttgctgatattacccaggcttgggtaacaggtagctccattgaatctatagcgaagact
tactttgaaggtgatagccttacggatcaaatatctaaagcttgcagagctgtttataga
gatttggccaataatggcgcttgggggttgtcggcattaagcaaaatgccaacttcaggg
cttgattttgaagccatgacagacgaagaaaagcgcagattaaataacctcccagcgatg
ctttaccatggcgtgaaaaccgaagaaggcgtgttgatgcgcatgaacaacgttccacga
agcattgctgaacgtgccggtgaagactttaaggctcgaactgaagccggtgcagaaaat
actctgtcacctcgaaaagccagcgaatatctgaagtctttgaaaccggatgattgggcg
cgtttgaaacctgataattcctcgctgtccggcgaagactatttgaaagtatggaagcgg
ctttcaggtgaagcttaa
DBGET
integrated database retrieval system
