Alteromonas mediterranea DE: MADE_1020530
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Entry
MADE_1020530 CDS
T00747
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amc03016
]
MADE_1020530 (trmE)
Transfer RNA biogenesis [BR:
amc03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
MADE_1020530 (trmE)
Prokaryotic type
Methyltransferases
MADE_1020530 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Ras
AIG1
SRPRB
Arf
ABC_tran
Gtr1_RagA
Roc
AAA_18
DUF5129
AAA_28
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEB00229
UniProt:
F2GD51
LinkDB
All DBs
Position
complement(4475941..4477329)
Genome browser
AA seq
462 aa
AA seq
DB search
MESLTLSTDTITAQATAPGRGGVGIVRVSGPKAKAIAEALVPSELTPRLATYTPFVDANK
SVIDQGIALFFKGPNSFTGEDVLELQGHGGQVVMDMLIDAVLATGHARLASPGEFSEQAF
LNDKLDLAQAEAIADLIDASSKQAARSALRSLQGEFSTQIQTLSDQIVHLRMYVEAAIDF
PEEEIDFLSDGKISGDLSTIMQSLTKVRDQAKQGTLLREGMQVVIAGRPNAGKSSLLNAL
AGRDSAIVTDIAGTTRDVLKEHIHIDGMPVHIIDTAGLRESPDKVEQIGIERAWQAINEA
DHVLFVVDSTATSVIDPYEIWPEFMARLPQGIPVTVVRNKADLSTLSIGQSSVNTQQGDI
SVINLSAKEGSGVDTLKAHLAKTMGFDTTTEGQFIARRRHIDALDQAYSYVSTGEQQLHD
AMAGELLAEELRLAHQALCEITGEFTPDDLLGKIFSSFCIGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaatcactcaccctttctaccgacaccattaccgcacaagctacggcccctggccgt
ggcggcgtaggtattgtgcgtgtatctggaccaaaagcaaaagccattgctgaagcgtta
gtaccaagtgagcttacaccccgccttgcaacctatacgccctttgttgacgccaataaa
agcgtaatagaccaaggtatcgcgctattttttaaaggcccgaattcgtttaccggtgag
gatgtgcttgaactacaaggccacggcggtcaggttgttatggacatgcttatagacgcc
gtacttgctaccgggcacgccaggttggccagccctggcgagtttagcgaacaagccttt
ttaaatgacaagctcgaccttgcacaagcagaggccatagcagatttaattgatgctagc
tctaagcaagccgcacgtagcgctttacgttcgctacagggtgagttttccacacaaatt
caaacgttgtcagaccaaatcgtacaccttcgtatgtacgttgaggcagccatcgacttt
ccagaagaagaaatcgacttcttatcagatggaaaaatatcaggtgacttaagtactatc
atgcaaagtctgactaaagtacgtgaccaggcgaaacaaggtaccttgctgcgcgaaggg
atgcaggtggttattgccggtcgtccaaatgcgggtaaatcgagcttgctaaatgccctc
gctggccgcgacagtgcaatcgtaaccgacatagcaggtaccacacgagatgtgcttaaa
gagcacatacatattgacggaatgccggttcacataattgataccgcaggtcttcgtgaa
agccctgataaagtagaacaaataggtatcgaacgagcgtggcaagctatcaatgaggca
gatcatgttttatttgttgtagattccactgcaacaagcgttattgacccttatgaaata
tggcctgaatttatggctcgcctgccacaaggcatacctgttacggtagtacgcaataaa
gctgatctgagtacattgagtattggacaaagcagcgttaatacccagcagggggatatt
tcggtaattaacctctctgcaaaagaaggcagcggcgtagacacacttaaagcacatttg
gccaagaccatgggcttcgacacaacgaccgaaggccagtttattgcccgtcgacgtcat
attgatgcacttgatcaagcctacagctatgtgagcaccggcgagcaacaattgcatgat
gcaatggcaggcgagctgctagcggaagaattgaggttggcccatcaggcactctgtgag
ataaccggtgaatttaccccagacgatctacttggcaaaatattttcatcattctgtatt
ggcaagtaa
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