Amycolatopsis mediterranei U32: AMED_0067
Help
Entry
AMED_0067 CDS
T01269
Name
(GenBank) periplasmic substrate-binding component of ABC-type dipeptide/oligopeptide transport system
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMED_0067
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amd02000
]
AMED_0067
Transporters [BR:
amd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AMED_0067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADJ41891
UniProt:
A0A0H3CX33
LinkDB
All DBs
Position
71616..73085
Genome browser
AA seq
489 aa
AA seq
DB search
MAAVLLLAVSGCSAGSSASVSAGPNTLSVGFTAEPANFDFTRTDGAAIPQALLYNVYEGL
VRLDAQGRVVPLLAKSWTISPDRKTYDFQLQQGVKFSNGAPFTAEDVKFSLLRVKTDWTI
SIKANMDVIDHVDVEAPDHARVVLSKPSNGWLFSLTSRLGAMFSPTGIADLANKPVGTGP
YVVAARKRGDSVVLKANPAYWGRKPAYGTVVLKYIKDPTALNNALFSNGIDVISAITAPD
SIPQFQADDRFQVVQGTSNSEVTLAMNNARPPLNDVRVRQALTYAIDRKALLDTAWAGRG
TLIGSMVPPTDPWYEDLANVHPFDPAKAKALLTEAHATNLNLRLRIPNLPYAVSAAQVVQ
SQLADVGVRTTIEPLDFPAVWLKQVFTDHDYDLSIIQHVEARDITTFGKPKYYWGYDSKR
VQQLLAEADSGTPEQQVADMKQVARQLNTDAAADWLFLFPNVIVAKAKVGGFVQNQVSES
FDLTGLAPR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcggtgctgctgctggcggtgtccggctgctcggccggctcgtcggcgagcgtt
tccgcaggtccgaacacgctttccgtcggcttcacggcggagccggcgaacttcgacttc
acccgcaccgacggcgccgccattccgcaggcgctgctctacaacgtctacgaaggcctg
gtgcggctcgacgcgcaaggccgtgtggtgccgctgctcgcgaagtcgtggaccatcagc
ccggaccggaagacctacgacttccagctccagcagggcgtcaagttcagcaacggcgcc
cccttcaccgccgaggacgtcaagttctcgctcctgcgggtgaagaccgactggacgatc
tcgatcaaggcgaacatggacgtcatcgaccacgtcgacgtcgaggcgccggaccacgcg
cgggttgtcctctcgaagccgtccaacggctggctgttcagcctcaccagccggctcggc
gcgatgttcagccccaccggaatcgccgacctggcgaacaagccggtcggtaccgggccg
tacgtcgtggcggcgcgcaagcgcggcgactccgtggtgctgaaggcgaatccggcctac
tggggccggaaaccggcgtacggcacggtcgtcctcaagtacatcaaggacccgaccgcg
ctgaacaacgcgttgttcagcaacggcatcgacgtcatctccgcgatcaccgcgcccgac
tcgatcccgcagttccaggccgacgaccggttccaggtcgtccagggcacctcgaactcc
gaagtcacgctggcgatgaacaacgcccggccgcccctgaacgacgtccgcgtgcgccag
gcgctgacgtacgcgatcgaccggaaggcgctgctcgacacggcgtgggcgggccgcggc
acgttgatcggcagtatggtcccgccgaccgacccctggtacgaggacctggcgaacgtc
catccgttcgatcccgcgaaggcgaaagcgctgctgacggaagcgcatgcgacgaacctg
aacctgcggttgcgaatcccgaacctgccgtacgcggtgtcggcggcgcaggtcgtccag
tcgcagctcgccgacgtcggcgtgcggaccacgatcgagccgctcgacttcccggcggtg
tggctcaagcaagtgttcaccgaccacgactacgacctgtcgatcatccagcacgtcgag
gcgcgggacatcacgacgttcgggaagccgaagtactactggggttacgacagcaagcgc
gtccagcagctgctcgccgaggccgacagcggcacgccggagcagcaggtcgcggacatg
aagcaggtggcgcggcagctgaacaccgacgcggccgcggactggctgttcctgttcccc
aacgtcatcgtggcgaaggccaaggtcggcgggttcgtccagaaccaggtcagcgagtcc
ttcgacctcaccgggctggcgccgcgatga
DBGET
integrated database retrieval system
